Gene : Glyma.01G031700 G. max Wm82.a2.v1
Defline:  (1 of 16) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  317
Name:  ? Glyma.01G031700 Secondary Identifier:  ? PAC:30541734
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G031700 0.5kb upstream 0.5kb upstream 3773 true Chr01: 3298361-3302133 Glycine max
Glyma.01G031700 0.5kb upstream 0.5kb upstream 500 false Chr01: 3298361-3298860 Glycine max
Glyma.01G031700 0.5kb downstream 0.5kb downstream 3773 true Chr01: 3298861-3302633 Glycine max
Glyma.01G031700 0.5kb downstream 0.5kb downstream 500 false Chr01: 3302134-3302633 Glycine max
Glyma.01G031700 1.0kb upstream 1.0kb upstream 4273 true Chr01: 3297861-3302133 Glycine max
Glyma.01G031700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3297861-3298860 Glycine max
Glyma.01G031700 1.0kb downstream 1.0kb downstream 4273 true Chr01: 3298861-3303133 Glycine max
Glyma.01G031700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3302134-3303133 Glycine max
Glyma.01G031700 2.0kb upstream 2.0kb upstream 5273 true Chr01: 3296861-3302133 Glycine max
Glyma.01G031700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3296861-3298860 Glycine max
Glyma.01G031700 2.0kb downstream 2.0kb downstream 5273 true Chr01: 3298861-3304133 Glycine max
Glyma.01G031700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3302134-3304133 Glycine max
Glyma.01G031700 5.0kb upstream 5.0kb upstream 8273 true Chr01: 3293861-3302133 Glycine max
Glyma.01G031700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3293861-3298860 Glycine max
Glyma.01G031700 5.0kb downstream 5.0kb downstream 8273 true Chr01: 3298861-3307133 Glycine max
Glyma.01G031700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3302134-3307133 Glycine max
Glyma.01G031700 10.0kb upstream 10.0kb upstream 13273 true Chr01: 3288861-3302133 Glycine max
Glyma.01G031700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3288861-3298860 Glycine max
Glyma.01G031700 10.0kb downstream 10.0kb downstream 13273 true Chr01: 3298861-3312133 Glycine max
Glyma.01G031700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3302134-3312133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309864 5265 Fabidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2701 0.0 48.8927   Low
cufflinks 32.9913 0.0 88.5873 High  
cufflinks 19.6128 0.0 52.3864   Low
cufflinks 22.3732 0.0 59.6929 High Low
cufflinks 87.0136 0.0 255.014 High High
cufflinks 48.2768 0.0 132.539 High  
cufflinks 65.0869 0.0 183.535 High  
cufflinks 62.5694 0.0 176.284 High  
cufflinks 63.1138 0.0 177.908 High  
cufflinks 18.081     High  
cufflinks 2.943       Low
cufflinks 11.745     High  
cufflinks 38.749     High High
cufflinks 50.442     High High
cufflinks 5.242     High Low
cufflinks 10.943     High  
cufflinks 18.46     High  
cufflinks 14.786     High  
cufflinks 17.157     High  
cufflinks 7.561     High  
cufflinks 7.986     High  
cufflinks 9.572     High  
cufflinks 23.591     High  
cufflinks 12.317     High  
cufflinks 9.511     High  
cufflinks 8.192     High  

0 Strain