Gene : Glyma.18G247800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15615:SF28 - CYCLIN-U4-1 Genomic Order:  2478
Name:  ? Glyma.18G247800 Secondary Identifier:  ? PAC:30557348
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G247800 0.5kb upstream 0.5kb upstream 2395 true Chr18: 53497634-53500028 Glycine max
Glyma.18G247800 0.5kb upstream 0.5kb upstream 500 false Chr18: 53499529-53500028 Glycine max
Glyma.18G247800 0.5kb downstream 0.5kb downstream 2395 true Chr18: 53497134-53499528 Glycine max
Glyma.18G247800 0.5kb downstream 0.5kb downstream 500 false Chr18: 53497134-53497633 Glycine max
Glyma.18G247800 1.0kb upstream 1.0kb upstream 2895 true Chr18: 53497634-53500528 Glycine max
Glyma.18G247800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53499529-53500528 Glycine max
Glyma.18G247800 1.0kb downstream 1.0kb downstream 2895 true Chr18: 53496634-53499528 Glycine max
Glyma.18G247800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53496634-53497633 Glycine max
Glyma.18G247800 2.0kb upstream 2.0kb upstream 3895 true Chr18: 53497634-53501528 Glycine max
Glyma.18G247800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53499529-53501528 Glycine max
Glyma.18G247800 2.0kb downstream 2.0kb downstream 3895 true Chr18: 53495634-53499528 Glycine max
Glyma.18G247800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53495634-53497633 Glycine max
Glyma.18G247800 5.0kb upstream 5.0kb upstream 6895 true Chr18: 53497634-53504528 Glycine max
Glyma.18G247800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53499529-53504528 Glycine max
Glyma.18G247800 5.0kb downstream 5.0kb downstream 6895 true Chr18: 53492634-53499528 Glycine max
Glyma.18G247800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53492634-53497633 Glycine max
Glyma.18G247800 10.0kb upstream 10.0kb upstream 11895 true Chr18: 53497634-53509528 Glycine max
Glyma.18G247800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53499529-53509528 Glycine max
Glyma.18G247800 10.0kb downstream 10.0kb downstream 11895 true Chr18: 53487634-53499528 Glycine max
Glyma.18G247800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53487634-53497633 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309500 5265 Fabidae View MSA
124073858 5270 Rosid View MSA
123743073 5271 Pentapetalae View MSA
122792546 5272 Eudicot View MSA
122043012 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.657035 0.0 2.49874   Low
cufflinks 3.14806 0.0 10.8473    
cufflinks 2.28507 0.0 8.09771    
cufflinks 20.2027 0.0 55.3731 High High
cufflinks 5.69193 0.0 18.2672    
cufflinks 11.8579 0.0 34.3748    
cufflinks 2.63627 0.0 9.246    
cufflinks 9.40815 0.0 27.971    
cufflinks 6.60958 0.0 20.6982    
cufflinks 11.142     High High
cufflinks 0.733        
cufflinks 1.05        
cufflinks 3.318        
cufflinks 4.036       High
cufflinks 0.675        
cufflinks 1.593        
cufflinks 1.807        
cufflinks 2.268        
cufflinks 1.586        
cufflinks 0.824        
cufflinks 0.775        
cufflinks 0.823        
cufflinks 2.316        
cufflinks 0.28       Low
cufflinks 1.173        
cufflinks 3.812       High

0 Strain