Gene : Glyma.01G053200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13345:SF4 - PROTEIN UXT Genomic Order:  532
Name:  ? Glyma.01G053200 Secondary Identifier:  ? PAC:30545196
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G053200 0.5kb upstream 0.5kb upstream 6064 true Chr01: 6632524-6638587 Glycine max
Glyma.01G053200 0.5kb upstream 0.5kb upstream 500 false Chr01: 6638088-6638587 Glycine max
Glyma.01G053200 0.5kb downstream 0.5kb downstream 6064 true Chr01: 6632024-6638087 Glycine max
Glyma.01G053200 0.5kb downstream 0.5kb downstream 500 false Chr01: 6632024-6632523 Glycine max
Glyma.01G053200 1.0kb upstream 1.0kb upstream 6564 true Chr01: 6632524-6639087 Glycine max
Glyma.01G053200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6638088-6639087 Glycine max
Glyma.01G053200 1.0kb downstream 1.0kb downstream 6564 true Chr01: 6631524-6638087 Glycine max
Glyma.01G053200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6631524-6632523 Glycine max
Glyma.01G053200 2.0kb upstream 2.0kb upstream 7564 true Chr01: 6632524-6640087 Glycine max
Glyma.01G053200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6638088-6640087 Glycine max
Glyma.01G053200 2.0kb downstream 2.0kb downstream 7564 true Chr01: 6630524-6638087 Glycine max
Glyma.01G053200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6630524-6632523 Glycine max
Glyma.01G053200 5.0kb upstream 5.0kb upstream 10564 true Chr01: 6632524-6643087 Glycine max
Glyma.01G053200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6638088-6643087 Glycine max
Glyma.01G053200 5.0kb downstream 5.0kb downstream 10564 true Chr01: 6627524-6638087 Glycine max
Glyma.01G053200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6627524-6632523 Glycine max
Glyma.01G053200 10.0kb upstream 10.0kb upstream 15564 true Chr01: 6632524-6648087 Glycine max
Glyma.01G053200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6638088-6648087 Glycine max
Glyma.01G053200 10.0kb downstream 10.0kb downstream 15564 true Chr01: 6622524-6638087 Glycine max
Glyma.01G053200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6622524-6632523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300850 5265 Fabidae View MSA
124065289 5270 Rosid View MSA
123736962 5271 Pentapetalae View MSA
122786813 5272 Eudicot View MSA
122042898 5273 Angiosperm View MSA
121347862 5274 Embryophyte View MSA
123425882 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.09302 0.0 21.4463    
cufflinks 7.99802 0.0 23.7605    
cufflinks 5.78717 0.0 17.8691   Low
cufflinks 7.35229 0.0 22.044    
cufflinks 7.37762 0.0 22.2035    
cufflinks 7.64039 0.0 22.8521    
cufflinks 9.22537 0.0 26.9937   High
cufflinks 5.78479 0.0 17.9497   Low
cufflinks 7.5009 0.0 22.4663    
cufflinks 1.068        
cufflinks 0.508       Low
cufflinks 1.558        
cufflinks 2.029       High
cufflinks 2.265       High
cufflinks 0.546       Low
cufflinks 0.959        
cufflinks 0.707        
cufflinks 1.704       High
cufflinks 1.527        
cufflinks 1.063        
cufflinks 0.737        
cufflinks 1.18        
cufflinks 1.237        
cufflinks 0.595       Low
cufflinks 1.073        
cufflinks 0.797        

0 Strain