Gene : Glyma.01G050100 G. max Wm82.a2.v1
Defline:  (1 of 79) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  501
Name:  ? Glyma.01G050100 Secondary Identifier:  ? PAC:30544049
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G050100 0.5kb upstream 0.5kb upstream 2891 true Chr01: 5887154-5890044 Glycine max
Glyma.01G050100 0.5kb upstream 0.5kb upstream 500 false Chr01: 5889545-5890044 Glycine max
Glyma.01G050100 0.5kb downstream 0.5kb downstream 2891 true Chr01: 5886654-5889544 Glycine max
Glyma.01G050100 0.5kb downstream 0.5kb downstream 500 false Chr01: 5886654-5887153 Glycine max
Glyma.01G050100 1.0kb upstream 1.0kb upstream 3391 true Chr01: 5887154-5890544 Glycine max
Glyma.01G050100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5889545-5890544 Glycine max
Glyma.01G050100 1.0kb downstream 1.0kb downstream 3391 true Chr01: 5886154-5889544 Glycine max
Glyma.01G050100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5886154-5887153 Glycine max
Glyma.01G050100 2.0kb upstream 2.0kb upstream 4391 true Chr01: 5887154-5891544 Glycine max
Glyma.01G050100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5889545-5891544 Glycine max
Glyma.01G050100 2.0kb downstream 2.0kb downstream 4391 true Chr01: 5885154-5889544 Glycine max
Glyma.01G050100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5885154-5887153 Glycine max
Glyma.01G050100 5.0kb upstream 5.0kb upstream 7391 true Chr01: 5887154-5894544 Glycine max
Glyma.01G050100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5889545-5894544 Glycine max
Glyma.01G050100 5.0kb downstream 5.0kb downstream 7391 true Chr01: 5882154-5889544 Glycine max
Glyma.01G050100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5882154-5887153 Glycine max
Glyma.01G050100 10.0kb upstream 10.0kb upstream 12391 true Chr01: 5887154-5899544 Glycine max
Glyma.01G050100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5889545-5899544 Glycine max
Glyma.01G050100 10.0kb downstream 10.0kb downstream 12391 true Chr01: 5877154-5889544 Glycine max
Glyma.01G050100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5877154-5887153 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.5023 0.0 78.9375 High  
cufflinks 45.2275 0.0 159.727 High  
cufflinks 15.6836 0.0 53.3818    
cufflinks 35.7037 0.0 122.303 High  
cufflinks 21.1386 0.0 71.0097 High  
cufflinks 17.5759 0.0 59.4117    
cufflinks 6.25426 0.0 25.4155   Low
cufflinks 347.711 0.0 2454.04 High High
cufflinks 27.4601 0.0 92.4319 High  
cufflinks 21.031     High High
cufflinks 0.216       Low
cufflinks 3.538        
cufflinks 5.152        
cufflinks 2.677        
cufflinks 1.704        
cufflinks 9.464     High  
cufflinks 0.649        
cufflinks 15.489     High  
cufflinks 15.14     High  
cufflinks 7.478     High  
cufflinks 0.239       Low
cufflinks 9.309     High  
cufflinks 19.267     High High
cufflinks 0.089       Low
cufflinks 7.601     High  
cufflinks 0.373       Low

0 Strain