Gene : Glyma.01G056000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31471:SF5 - F7A19.1 PROTEIN-RELATED Genomic Order:  560
Name:  ? Glyma.01G056000 Secondary Identifier:  ? PAC:30542169
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G056000 0.5kb upstream 0.5kb upstream 3746 true Chr01: 7231999-7235744 Glycine max
Glyma.01G056000 0.5kb upstream 0.5kb upstream 500 false Chr01: 7235245-7235744 Glycine max
Glyma.01G056000 0.5kb downstream 0.5kb downstream 3746 true Chr01: 7231499-7235244 Glycine max
Glyma.01G056000 0.5kb downstream 0.5kb downstream 500 false Chr01: 7231499-7231998 Glycine max
Glyma.01G056000 1.0kb upstream 1.0kb upstream 4246 true Chr01: 7231999-7236244 Glycine max
Glyma.01G056000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7235245-7236244 Glycine max
Glyma.01G056000 1.0kb downstream 1.0kb downstream 4246 true Chr01: 7230999-7235244 Glycine max
Glyma.01G056000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7230999-7231998 Glycine max
Glyma.01G056000 2.0kb upstream 2.0kb upstream 5246 true Chr01: 7231999-7237244 Glycine max
Glyma.01G056000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7235245-7237244 Glycine max
Glyma.01G056000 2.0kb downstream 2.0kb downstream 5246 true Chr01: 7229999-7235244 Glycine max
Glyma.01G056000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7229999-7231998 Glycine max
Glyma.01G056000 5.0kb upstream 5.0kb upstream 8246 true Chr01: 7231999-7240244 Glycine max
Glyma.01G056000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7235245-7240244 Glycine max
Glyma.01G056000 5.0kb downstream 5.0kb downstream 8246 true Chr01: 7226999-7235244 Glycine max
Glyma.01G056000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7226999-7231998 Glycine max
Glyma.01G056000 10.0kb upstream 10.0kb upstream 13246 true Chr01: 7231999-7245244 Glycine max
Glyma.01G056000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7235245-7245244 Glycine max
Glyma.01G056000 10.0kb downstream 10.0kb downstream 13246 true Chr01: 7221999-7235244 Glycine max
Glyma.01G056000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7221999-7231998 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313838 5265 Fabidae View MSA
124067331 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.20698 0.0 1.43548 Low Low
cufflinks 0.190909 0.0 0.733947 Low Low
cufflinks 0.480996 0.0 2.23261    
cufflinks 0.247172 0.0 1.65121    
cufflinks 0.470893 0.0 2.90711    
cufflinks 0.38612 0.0 1.87508    
cufflinks 0.275631 0.0 1.96019    
cufflinks 0.704552 0.0 4.4412   High
cufflinks 0.711709 0.0 4.15832   High
cufflinks 0.493       High
cufflinks 0.259        
cufflinks 0.161        
cufflinks 0.569       High
cufflinks 0.113        
cufflinks 0.05     Low Low
cufflinks 0.115        
cufflinks 0.154        
cufflinks 0.44       High
cufflinks 0.038     Low Low
cufflinks 0.182        
cufflinks 0.378        
cufflinks 0.172        
cufflinks 0.116        
cufflinks 0.201        
cufflinks 0.183        
cufflinks 0.265        

0 Strain