Gene : Glyma.18G249300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR37228:SF1 - RIBOSOMAL PROTEIN S21 FAMILY PROTEIN Genomic Order:  2493
Name:  ? Glyma.18G249300 Secondary Identifier:  ? PAC:30558165
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G249300 0.5kb upstream 0.5kb upstream 3329 true Chr18: 53574459-53577787 Glycine max
Glyma.18G249300 0.5kb upstream 0.5kb upstream 500 false Chr18: 53574459-53574958 Glycine max
Glyma.18G249300 0.5kb downstream 0.5kb downstream 3329 true Chr18: 53574959-53578287 Glycine max
Glyma.18G249300 0.5kb downstream 0.5kb downstream 500 false Chr18: 53577788-53578287 Glycine max
Glyma.18G249300 1.0kb upstream 1.0kb upstream 3829 true Chr18: 53573959-53577787 Glycine max
Glyma.18G249300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53573959-53574958 Glycine max
Glyma.18G249300 1.0kb downstream 1.0kb downstream 3829 true Chr18: 53574959-53578787 Glycine max
Glyma.18G249300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53577788-53578787 Glycine max
Glyma.18G249300 2.0kb upstream 2.0kb upstream 4829 true Chr18: 53572959-53577787 Glycine max
Glyma.18G249300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53572959-53574958 Glycine max
Glyma.18G249300 2.0kb downstream 2.0kb downstream 4829 true Chr18: 53574959-53579787 Glycine max
Glyma.18G249300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53577788-53579787 Glycine max
Glyma.18G249300 5.0kb upstream 5.0kb upstream 7829 true Chr18: 53569959-53577787 Glycine max
Glyma.18G249300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53569959-53574958 Glycine max
Glyma.18G249300 5.0kb downstream 5.0kb downstream 7829 true Chr18: 53574959-53582787 Glycine max
Glyma.18G249300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53577788-53582787 Glycine max
Glyma.18G249300 10.0kb upstream 10.0kb upstream 12829 true Chr18: 53564959-53577787 Glycine max
Glyma.18G249300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53564959-53574958 Glycine max
Glyma.18G249300 10.0kb downstream 10.0kb downstream 12829 true Chr18: 53574959-53587787 Glycine max
Glyma.18G249300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53577788-53587787 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308043 5265 Fabidae View MSA
124068112 5270 Rosid View MSA
123738375 5271 Pentapetalae View MSA
122788948 5272 Eudicot View MSA
122049752 5273 Angiosperm View MSA
121311575 5274 Embryophyte View MSA
123348853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15994 0.0 20.7959    
cufflinks 7.23042 0.0 20.8874    
cufflinks 5.79036 0.0 17.1309   Low
cufflinks 7.09675 0.0 20.5699    
cufflinks 9.70065 0.0 27.25    
cufflinks 13.4114 0.0 36.5832   High
cufflinks 8.80302 0.0 25.0405    
cufflinks 8.10585 0.0 23.1324    
cufflinks 9.66646 0.0 27.0699    
cufflinks 3.262        
cufflinks 1.962       Low
cufflinks 2.98        
cufflinks 5.88       High
cufflinks 6.568       High
cufflinks 2.447        
cufflinks 2.657        
cufflinks 2.233        
cufflinks 4.292       High
cufflinks 2.766        
cufflinks 2.432        
cufflinks 2.54        
cufflinks 2.691        
cufflinks 3.253        
cufflinks 3.013        
cufflinks 2.499        
cufflinks 2.393        

0 Strain