Gene : Glyma.01G055000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Genomic Order:  550
Name:  ? Glyma.01G055000 Secondary Identifier:  ? PAC:30541992
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G055000 0.5kb upstream 0.5kb upstream 3154 true Chr01: 7113117-7116270 Glycine max
Glyma.01G055000 0.5kb upstream 0.5kb upstream 500 false Chr01: 7115771-7116270 Glycine max
Glyma.01G055000 0.5kb downstream 0.5kb downstream 3154 true Chr01: 7112617-7115770 Glycine max
Glyma.01G055000 0.5kb downstream 0.5kb downstream 500 false Chr01: 7112617-7113116 Glycine max
Glyma.01G055000 1.0kb upstream 1.0kb upstream 3654 true Chr01: 7113117-7116770 Glycine max
Glyma.01G055000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7115771-7116770 Glycine max
Glyma.01G055000 1.0kb downstream 1.0kb downstream 3654 true Chr01: 7112117-7115770 Glycine max
Glyma.01G055000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7112117-7113116 Glycine max
Glyma.01G055000 2.0kb upstream 2.0kb upstream 4654 true Chr01: 7113117-7117770 Glycine max
Glyma.01G055000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7115771-7117770 Glycine max
Glyma.01G055000 2.0kb downstream 2.0kb downstream 4654 true Chr01: 7111117-7115770 Glycine max
Glyma.01G055000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7111117-7113116 Glycine max
Glyma.01G055000 5.0kb upstream 5.0kb upstream 7654 true Chr01: 7113117-7120770 Glycine max
Glyma.01G055000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7115771-7120770 Glycine max
Glyma.01G055000 5.0kb downstream 5.0kb downstream 7654 true Chr01: 7108117-7115770 Glycine max
Glyma.01G055000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7108117-7113116 Glycine max
Glyma.01G055000 10.0kb upstream 10.0kb upstream 12654 true Chr01: 7113117-7125770 Glycine max
Glyma.01G055000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7115771-7125770 Glycine max
Glyma.01G055000 10.0kb downstream 10.0kb downstream 12654 true Chr01: 7103117-7115770 Glycine max
Glyma.01G055000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7103117-7113116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302441 5265 Fabidae View MSA
124064311 5270 Rosid View MSA
123738322 5271 Pentapetalae View MSA
122791068 5272 Eudicot View MSA
122042026 5273 Angiosperm View MSA
121345511 5274 Embryophyte View MSA
123424975 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.91297 0.0 3.39032   High
cufflinks 0.500958 0.0 1.91148    
cufflinks 0.493119 0.0 1.87953    
cufflinks 0.521589 0.0 1.98456    
cufflinks 0.187986 0.0 0.745939 Low Low
cufflinks 0.184283 0.0 0.731884 Low Low
cufflinks 1.04149 0.0 3.8425   High
cufflinks 0.214338 0.0 0.845784 Low  
cufflinks 0.219801 0.0 0.867123 Low  
cufflinks 0.42        
cufflinks 0.128       Low
cufflinks 1.359        
cufflinks 0.488        
cufflinks 0.324        
cufflinks 1.48        
cufflinks 1.268        
cufflinks 0.125       Low
cufflinks 1.562        
cufflinks 1.507        
cufflinks 1.229        
cufflinks 0.171       Low
cufflinks 1.404        
cufflinks 1.399        
cufflinks 0.125       Low
cufflinks 1.536        
cufflinks 0.146       Low

0 Strain