Gene : Glyma.18G287400 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  2874
Name:  ? Glyma.18G287400 Secondary Identifier:  ? PAC:30555264
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5084 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G287400 0.5kb upstream 0.5kb upstream 8006 true Chr18: 56740754-56748759 Glycine max
Glyma.18G287400 0.5kb upstream 0.5kb upstream 500 false Chr18: 56748260-56748759 Glycine max
Glyma.18G287400 0.5kb downstream 0.5kb downstream 8006 true Chr18: 56740254-56748259 Glycine max
Glyma.18G287400 0.5kb downstream 0.5kb downstream 500 false Chr18: 56740254-56740753 Glycine max
Glyma.18G287400 1.0kb upstream 1.0kb upstream 8506 true Chr18: 56740754-56749259 Glycine max
Glyma.18G287400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56748260-56749259 Glycine max
Glyma.18G287400 1.0kb downstream 1.0kb downstream 8506 true Chr18: 56739754-56748259 Glycine max
Glyma.18G287400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56739754-56740753 Glycine max
Glyma.18G287400 2.0kb upstream 2.0kb upstream 9506 true Chr18: 56740754-56750259 Glycine max
Glyma.18G287400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56748260-56750259 Glycine max
Glyma.18G287400 2.0kb downstream 2.0kb downstream 9506 true Chr18: 56738754-56748259 Glycine max
Glyma.18G287400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56738754-56740753 Glycine max
Glyma.18G287400 5.0kb upstream 5.0kb upstream 12506 true Chr18: 56740754-56753259 Glycine max
Glyma.18G287400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56748260-56753259 Glycine max
Glyma.18G287400 5.0kb downstream 5.0kb downstream 12506 true Chr18: 56735754-56748259 Glycine max
Glyma.18G287400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56735754-56740753 Glycine max
Glyma.18G287400 10.0kb upstream 10.0kb upstream 17506 true Chr18: 56740754-56758259 Glycine max
Glyma.18G287400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56748260-56758259 Glycine max
Glyma.18G287400 10.0kb downstream 10.0kb downstream 17506 true Chr18: 56730754-56748259 Glycine max
Glyma.18G287400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56730754-56740753 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311789 5265 Fabidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.879 0.0 96.6915 High  
cufflinks 17.2063 0.0 63.9914    
cufflinks 13.0094 0.0 46.3592   Low
cufflinks 20.3036 0.0 78.654 High  
cufflinks 45.1366 0.0 195.491 High High
cufflinks 45.8038 0.0 200.986 High High
cufflinks 26.2506 0.0 93.7931 High  
cufflinks 22.4612 0.0 77.0135 High  
cufflinks 26.4849 0.0 95.0241 High  
cufflinks 10.357     High  
cufflinks 8.761     High  
cufflinks 6.328        
cufflinks 19.286     High High
cufflinks 21.797     High High
cufflinks 4.605       Low
cufflinks 4.584       Low
cufflinks 10.656     High  
cufflinks 7.859     High  
cufflinks 7.428     High  
cufflinks 4.037       Low
cufflinks 8.992     High  
cufflinks 4.859        
cufflinks 5.533        
cufflinks 11.047     High  
cufflinks 4.098       Low
cufflinks 9.169     High  

0 Strain