Gene : Glyma.02G136600 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1366
Name:  ? Glyma.02G136600 Secondary Identifier:  ? PAC:30506231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G136600 0.5kb upstream 0.5kb upstream 4685 true Chr02: 14129031-14133715 Glycine max
Glyma.02G136600 0.5kb upstream 0.5kb upstream 500 false Chr02: 14133216-14133715 Glycine max
Glyma.02G136600 0.5kb downstream 0.5kb downstream 4685 true Chr02: 14128531-14133215 Glycine max
Glyma.02G136600 0.5kb downstream 0.5kb downstream 500 false Chr02: 14128531-14129030 Glycine max
Glyma.02G136600 1.0kb upstream 1.0kb upstream 5185 true Chr02: 14129031-14134215 Glycine max
Glyma.02G136600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14133216-14134215 Glycine max
Glyma.02G136600 1.0kb downstream 1.0kb downstream 5185 true Chr02: 14128031-14133215 Glycine max
Glyma.02G136600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14128031-14129030 Glycine max
Glyma.02G136600 2.0kb upstream 2.0kb upstream 6185 true Chr02: 14129031-14135215 Glycine max
Glyma.02G136600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14133216-14135215 Glycine max
Glyma.02G136600 2.0kb downstream 2.0kb downstream 6185 true Chr02: 14127031-14133215 Glycine max
Glyma.02G136600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14127031-14129030 Glycine max
Glyma.02G136600 5.0kb upstream 5.0kb upstream 9185 true Chr02: 14129031-14138215 Glycine max
Glyma.02G136600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14133216-14138215 Glycine max
Glyma.02G136600 5.0kb downstream 5.0kb downstream 9185 true Chr02: 14124031-14133215 Glycine max
Glyma.02G136600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14124031-14129030 Glycine max
Glyma.02G136600 10.0kb upstream 10.0kb upstream 14185 true Chr02: 14129031-14143215 Glycine max
Glyma.02G136600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14133216-14143215 Glycine max
Glyma.02G136600 10.0kb downstream 10.0kb downstream 14185 true Chr02: 14119031-14133215 Glycine max
Glyma.02G136600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14119031-14129030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304567 5265 Fabidae View MSA
124071074 5270 Rosid View MSA
123742346 5271 Pentapetalae View MSA
122794962 5272 Eudicot View MSA
122044957 5273 Angiosperm View MSA
121352585 5274 Embryophyte View MSA
123382887 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.503395 0.0 1.85265   High
cufflinks 0.157141 0.0 0.610331 Low  
cufflinks 0.155712 0.0 0.604154 Low  
cufflinks 0.185158 0.0 0.713446    
cufflinks 0.165002 0.0 0.639279 Low  
cufflinks 0.105688 0.0 0.416422 Low Low
cufflinks 0.199423 0.0 0.76603 Low  
cufflinks 0.123897 0.0 0.48536 Low  
cufflinks 0.193442 0.0 0.744056 Low  
cufflinks 0.082     Low Low
cufflinks 1.394       High
cufflinks 0.394        
cufflinks 0.189        
cufflinks 0.33        
cufflinks 0.724        
cufflinks 0.33        
cufflinks 0.141       Low
cufflinks 0.238        
cufflinks 0.302        
cufflinks 0.604        
cufflinks 1.155       High
cufflinks 0.441        
cufflinks 0.156       Low
cufflinks 0.673        
cufflinks 0.281        
cufflinks 0.897       High

0 Strain