Gene : Glyma.02G130100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20922:SF17 - F24J5.3 Genomic Order:  1301
Name:  ? Glyma.02G130100 Secondary Identifier:  ? PAC:30510633
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G130100 0.5kb upstream 0.5kb upstream 4203 true Chr02: 13332668-13336870 Glycine max
Glyma.02G130100 0.5kb upstream 0.5kb upstream 500 false Chr02: 13336371-13336870 Glycine max
Glyma.02G130100 0.5kb downstream 0.5kb downstream 4203 true Chr02: 13332168-13336370 Glycine max
Glyma.02G130100 0.5kb downstream 0.5kb downstream 500 false Chr02: 13332168-13332667 Glycine max
Glyma.02G130100 1.0kb upstream 1.0kb upstream 4703 true Chr02: 13332668-13337370 Glycine max
Glyma.02G130100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13336371-13337370 Glycine max
Glyma.02G130100 1.0kb downstream 1.0kb downstream 4703 true Chr02: 13331668-13336370 Glycine max
Glyma.02G130100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13331668-13332667 Glycine max
Glyma.02G130100 2.0kb upstream 2.0kb upstream 5703 true Chr02: 13332668-13338370 Glycine max
Glyma.02G130100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13336371-13338370 Glycine max
Glyma.02G130100 2.0kb downstream 2.0kb downstream 5703 true Chr02: 13330668-13336370 Glycine max
Glyma.02G130100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13330668-13332667 Glycine max
Glyma.02G130100 5.0kb upstream 5.0kb upstream 8703 true Chr02: 13332668-13341370 Glycine max
Glyma.02G130100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13336371-13341370 Glycine max
Glyma.02G130100 5.0kb downstream 5.0kb downstream 8703 true Chr02: 13327668-13336370 Glycine max
Glyma.02G130100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13327668-13332667 Glycine max
Glyma.02G130100 10.0kb upstream 10.0kb upstream 13703 true Chr02: 13332668-13346370 Glycine max
Glyma.02G130100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13336371-13346370 Glycine max
Glyma.02G130100 10.0kb downstream 10.0kb downstream 13703 true Chr02: 13322668-13336370 Glycine max
Glyma.02G130100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13322668-13332667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309268 5265 Fabidae View MSA
124068181 5270 Rosid View MSA
123747456 5271 Pentapetalae View MSA
122796355 5272 Eudicot View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26694 0.0 38.6299    
cufflinks 12.0935 0.0 393.498   High
cufflinks 1.47947 0.0 21.8319   Low
cufflinks 2.35137 0.0 49.5013    
cufflinks 2.36793 0.0 27.0886    
cufflinks 2.72254 0.0 41.5832    
cufflinks 2.43637 0.0 22.2999    
cufflinks 4.30139 0.0 75.9323    
cufflinks 2.64285 0.0 35.5867    
cufflinks 0.105       Low
cufflinks 0.188        
cufflinks 0.089     Low Low
cufflinks 0.119        
cufflinks 0.113        
cufflinks 0.208        
cufflinks 0.216        
cufflinks 0.108        
cufflinks 0.108     Low  
cufflinks 0.145        
cufflinks 0.275       High
cufflinks 0.141        
cufflinks 0.255       High
cufflinks 0.238       High
cufflinks 0.144        
cufflinks 0.244       High
cufflinks 0.103       Low

0 Strain