Gene : Glyma.02G123400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Genomic Order:  1234
Name:  ? Glyma.02G123400 Secondary Identifier:  ? PAC:30508503
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G123400 0.5kb upstream 0.5kb upstream 5808 true Chr02: 12306442-12312249 Glycine max
Glyma.02G123400 0.5kb upstream 0.5kb upstream 500 false Chr02: 12311750-12312249 Glycine max
Glyma.02G123400 0.5kb downstream 0.5kb downstream 5808 true Chr02: 12305942-12311749 Glycine max
Glyma.02G123400 0.5kb downstream 0.5kb downstream 500 false Chr02: 12305942-12306441 Glycine max
Glyma.02G123400 1.0kb upstream 1.0kb upstream 6308 true Chr02: 12306442-12312749 Glycine max
Glyma.02G123400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12311750-12312749 Glycine max
Glyma.02G123400 1.0kb downstream 1.0kb downstream 6308 true Chr02: 12305442-12311749 Glycine max
Glyma.02G123400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12305442-12306441 Glycine max
Glyma.02G123400 2.0kb upstream 2.0kb upstream 7308 true Chr02: 12306442-12313749 Glycine max
Glyma.02G123400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12311750-12313749 Glycine max
Glyma.02G123400 2.0kb downstream 2.0kb downstream 7308 true Chr02: 12304442-12311749 Glycine max
Glyma.02G123400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12304442-12306441 Glycine max
Glyma.02G123400 5.0kb upstream 5.0kb upstream 10308 true Chr02: 12306442-12316749 Glycine max
Glyma.02G123400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12311750-12316749 Glycine max
Glyma.02G123400 5.0kb downstream 5.0kb downstream 10308 true Chr02: 12301442-12311749 Glycine max
Glyma.02G123400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12301442-12306441 Glycine max
Glyma.02G123400 10.0kb upstream 10.0kb upstream 15308 true Chr02: 12306442-12321749 Glycine max
Glyma.02G123400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12311750-12321749 Glycine max
Glyma.02G123400 10.0kb downstream 10.0kb downstream 15308 true Chr02: 12296442-12311749 Glycine max
Glyma.02G123400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12296442-12306441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301733 5265 Fabidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4689 0.0 64.3076    
cufflinks 17.5426 0.0 70.5248    
cufflinks 29.3579 0.0 139.935 High High
cufflinks 12.459 0.0 51.0456    
cufflinks 12.3351 0.0 49.8951   Low
cufflinks 22.3643 0.0 88.2816   High
cufflinks 12.648 0.0 62.5029    
cufflinks 16.6324 0.0 66.2939    
cufflinks 14.885 0.0 59.3937    
cufflinks 0.769        
cufflinks 1.223        
cufflinks 1.717       High
cufflinks 1.091        
cufflinks 0.945        
cufflinks 0.516       Low
cufflinks 0.888        
cufflinks 0.718       Low
cufflinks 1.584       High
cufflinks 1.758       High
cufflinks 0.782        
cufflinks 1.234        
cufflinks 0.852        
cufflinks 1.013        
cufflinks 1.453       High
cufflinks 0.789        
cufflinks 0.849        

0 Strain