Gene : Glyma.02G122700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33914:SF2 - 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  1227
Name:  ? Glyma.02G122700 Secondary Identifier:  ? PAC:30509086
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G122700 0.5kb upstream 0.5kb upstream 5762 true Chr02: 12225634-12231395 Glycine max
Glyma.02G122700 0.5kb upstream 0.5kb upstream 500 false Chr02: 12225634-12226133 Glycine max
Glyma.02G122700 0.5kb downstream 0.5kb downstream 5762 true Chr02: 12226134-12231895 Glycine max
Glyma.02G122700 0.5kb downstream 0.5kb downstream 500 false Chr02: 12231396-12231895 Glycine max
Glyma.02G122700 1.0kb upstream 1.0kb upstream 6262 true Chr02: 12225134-12231395 Glycine max
Glyma.02G122700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12225134-12226133 Glycine max
Glyma.02G122700 1.0kb downstream 1.0kb downstream 6262 true Chr02: 12226134-12232395 Glycine max
Glyma.02G122700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12231396-12232395 Glycine max
Glyma.02G122700 2.0kb upstream 2.0kb upstream 7262 true Chr02: 12224134-12231395 Glycine max
Glyma.02G122700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12224134-12226133 Glycine max
Glyma.02G122700 2.0kb downstream 2.0kb downstream 7262 true Chr02: 12226134-12233395 Glycine max
Glyma.02G122700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12231396-12233395 Glycine max
Glyma.02G122700 5.0kb upstream 5.0kb upstream 10262 true Chr02: 12221134-12231395 Glycine max
Glyma.02G122700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12221134-12226133 Glycine max
Glyma.02G122700 5.0kb downstream 5.0kb downstream 10262 true Chr02: 12226134-12236395 Glycine max
Glyma.02G122700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12231396-12236395 Glycine max
Glyma.02G122700 10.0kb upstream 10.0kb upstream 15262 true Chr02: 12216134-12231395 Glycine max
Glyma.02G122700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12216134-12226133 Glycine max
Glyma.02G122700 10.0kb downstream 10.0kb downstream 15262 true Chr02: 12226134-12241395 Glycine max
Glyma.02G122700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12231396-12241395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314778 5265 Fabidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7761 0.0 61.7102    
cufflinks 8.47716 0.0 39.1337    
cufflinks 4.47646 0.0 21.9871    
cufflinks 3.92037 0.0 20.4866   Low
cufflinks 4.50107 0.0 18.4917    
cufflinks 22.9241 0.0 97.0012 High High
cufflinks 4.06469 0.0 24.4957    
cufflinks 9.00668 0.0 47.8212    
cufflinks 10.0841 0.0 49.2574    
cufflinks 0.317       Low
cufflinks 0.715        
cufflinks 0.351        
cufflinks 0.467        
cufflinks 0.26       Low
cufflinks 0.821       High
cufflinks 0.426        
cufflinks 0.29       Low
cufflinks 0.552        
cufflinks 0.675        
cufflinks 0.359        
cufflinks 0.933       High
cufflinks 0.478        
cufflinks 0.472        
cufflinks 0.866       High
cufflinks 0.354        
cufflinks 1.02       High

0 Strain