Gene : Glyma.18G288200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22942:SF24 - DNA REPAIR PROTEIN XRCC3 Genomic Order:  2882
Name:  ? Glyma.18G288200 Secondary Identifier:  ? PAC:30558743
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G288200 0.5kb upstream 0.5kb upstream 1367 true Chr18: 56795210-56796576 Glycine max
Glyma.18G288200 0.5kb upstream 0.5kb upstream 500 false Chr18: 56796077-56796576 Glycine max
Glyma.18G288200 0.5kb downstream 0.5kb downstream 1367 true Chr18: 56794710-56796076 Glycine max
Glyma.18G288200 0.5kb downstream 0.5kb downstream 500 false Chr18: 56794710-56795209 Glycine max
Glyma.18G288200 1.0kb upstream 1.0kb upstream 1867 true Chr18: 56795210-56797076 Glycine max
Glyma.18G288200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56796077-56797076 Glycine max
Glyma.18G288200 1.0kb downstream 1.0kb downstream 1867 true Chr18: 56794210-56796076 Glycine max
Glyma.18G288200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56794210-56795209 Glycine max
Glyma.18G288200 2.0kb upstream 2.0kb upstream 2867 true Chr18: 56795210-56798076 Glycine max
Glyma.18G288200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56796077-56798076 Glycine max
Glyma.18G288200 2.0kb downstream 2.0kb downstream 2867 true Chr18: 56793210-56796076 Glycine max
Glyma.18G288200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56793210-56795209 Glycine max
Glyma.18G288200 5.0kb upstream 5.0kb upstream 5867 true Chr18: 56795210-56801076 Glycine max
Glyma.18G288200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56796077-56801076 Glycine max
Glyma.18G288200 5.0kb downstream 5.0kb downstream 5867 true Chr18: 56790210-56796076 Glycine max
Glyma.18G288200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56790210-56795209 Glycine max
Glyma.18G288200 10.0kb upstream 10.0kb upstream 10867 true Chr18: 56795210-56806076 Glycine max
Glyma.18G288200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56796077-56806076 Glycine max
Glyma.18G288200 10.0kb downstream 10.0kb downstream 10867 true Chr18: 56785210-56796076 Glycine max
Glyma.18G288200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56785210-56795209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309997 5265 Fabidae View MSA
124069391 5270 Rosid View MSA
123741903 5271 Pentapetalae View MSA
122794099 5272 Eudicot View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185669 0.0 0.743291 Low Low
cufflinks 0.719926 0.0 2.73611   High
cufflinks 0.270644 0.0 1.07409    
cufflinks 0.335761 0.0 1.31794    
cufflinks 0.43325 0.0 1.67441    
cufflinks 0.338144 0.0 1.32348    
cufflinks 0.43931 0.0 1.69975    
cufflinks 0.189018 0.0 0.756935 Low Low
cufflinks 0.788867 0.0 2.9783   High
cufflinks 0.229        
cufflinks 0.596        
cufflinks 0.142       Low
cufflinks 0.263        
cufflinks 0.253        
cufflinks 0.177       Low
cufflinks 0.565        
cufflinks 0.955       High
cufflinks 0.192       Low
cufflinks 0.447        
cufflinks 0.265        
cufflinks 0.339        
cufflinks 0.473        
cufflinks 0.416        
cufflinks 0.639       High
cufflinks 0.267        
cufflinks 0.933       High

0 Strain