Gene : Glyma.02G143000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10751:SF38 - GUANYLATE-BINDING FAMILY PROTEIN Genomic Order:  1430
Name:  ? Glyma.02G143000 Secondary Identifier:  ? PAC:30510539
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G143000 0.5kb upstream 0.5kb upstream 12767 true Chr02: 14735028-14747794 Glycine max
Glyma.02G143000 0.5kb upstream 0.5kb upstream 500 false Chr02: 14747295-14747794 Glycine max
Glyma.02G143000 0.5kb downstream 0.5kb downstream 12767 true Chr02: 14734528-14747294 Glycine max
Glyma.02G143000 0.5kb downstream 0.5kb downstream 500 false Chr02: 14734528-14735027 Glycine max
Glyma.02G143000 1.0kb upstream 1.0kb upstream 13267 true Chr02: 14735028-14748294 Glycine max
Glyma.02G143000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14747295-14748294 Glycine max
Glyma.02G143000 1.0kb downstream 1.0kb downstream 13267 true Chr02: 14734028-14747294 Glycine max
Glyma.02G143000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14734028-14735027 Glycine max
Glyma.02G143000 2.0kb upstream 2.0kb upstream 14267 true Chr02: 14735028-14749294 Glycine max
Glyma.02G143000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14747295-14749294 Glycine max
Glyma.02G143000 2.0kb downstream 2.0kb downstream 14267 true Chr02: 14733028-14747294 Glycine max
Glyma.02G143000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14733028-14735027 Glycine max
Glyma.02G143000 5.0kb upstream 5.0kb upstream 17267 true Chr02: 14735028-14752294 Glycine max
Glyma.02G143000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14747295-14752294 Glycine max
Glyma.02G143000 5.0kb downstream 5.0kb downstream 17267 true Chr02: 14730028-14747294 Glycine max
Glyma.02G143000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14730028-14735027 Glycine max
Glyma.02G143000 10.0kb upstream 10.0kb upstream 22267 true Chr02: 14735028-14757294 Glycine max
Glyma.02G143000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14747295-14757294 Glycine max
Glyma.02G143000 10.0kb downstream 10.0kb downstream 22267 true Chr02: 14725028-14747294 Glycine max
Glyma.02G143000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14725028-14735027 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299023 5265 Fabidae View MSA
124068701 5270 Rosid View MSA
123739498 5271 Pentapetalae View MSA
122793987 5272 Eudicot View MSA
122044138 5273 Angiosperm View MSA
121348015 5274 Embryophyte View MSA
123426957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.01306 0.0 16.6649   Low
cufflinks 4.81482 0.0 18.879    
cufflinks 3.18695 0.0 12.0553   Low
cufflinks 5.93948 0.0 22.0805    
cufflinks 8.34232 0.0 29.477   High
cufflinks 9.20958 0.0 32.2068   High
cufflinks 5.91942 0.0 19.1414    
cufflinks 6.28826 0.0 23.2352    
cufflinks 5.32259 0.0 17.7473    
cufflinks 0.733        
cufflinks 0.163       Low
cufflinks 0.463        
cufflinks 1.1       High
cufflinks 1.166       High
cufflinks 0.152       Low
cufflinks 0.647        
cufflinks 0.353        
cufflinks 0.822        
cufflinks 0.637        
cufflinks 0.616        
cufflinks 0.239       Low
cufflinks 0.662        
cufflinks 0.757        
cufflinks 0.206       Low
cufflinks 0.595        
cufflinks 0.234       Low

0 Strain