Gene : Glyma.02G151500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19924:SF26 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG Genomic Order:  1515
Name:  ? Glyma.02G151500 Secondary Identifier:  ? PAC:30506510
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G151500 0.5kb upstream 0.5kb upstream 2543 true Chr02: 15586232-15588774 Glycine max
Glyma.02G151500 0.5kb upstream 0.5kb upstream 500 false Chr02: 15586232-15586731 Glycine max
Glyma.02G151500 0.5kb downstream 0.5kb downstream 2543 true Chr02: 15586732-15589274 Glycine max
Glyma.02G151500 0.5kb downstream 0.5kb downstream 500 false Chr02: 15588775-15589274 Glycine max
Glyma.02G151500 1.0kb upstream 1.0kb upstream 3043 true Chr02: 15585732-15588774 Glycine max
Glyma.02G151500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15585732-15586731 Glycine max
Glyma.02G151500 1.0kb downstream 1.0kb downstream 3043 true Chr02: 15586732-15589774 Glycine max
Glyma.02G151500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15588775-15589774 Glycine max
Glyma.02G151500 2.0kb upstream 2.0kb upstream 4043 true Chr02: 15584732-15588774 Glycine max
Glyma.02G151500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15584732-15586731 Glycine max
Glyma.02G151500 2.0kb downstream 2.0kb downstream 4043 true Chr02: 15586732-15590774 Glycine max
Glyma.02G151500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15588775-15590774 Glycine max
Glyma.02G151500 5.0kb upstream 5.0kb upstream 7043 true Chr02: 15581732-15588774 Glycine max
Glyma.02G151500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15581732-15586731 Glycine max
Glyma.02G151500 5.0kb downstream 5.0kb downstream 7043 true Chr02: 15586732-15593774 Glycine max
Glyma.02G151500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15588775-15593774 Glycine max
Glyma.02G151500 10.0kb upstream 10.0kb upstream 12043 true Chr02: 15576732-15588774 Glycine max
Glyma.02G151500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15576732-15586731 Glycine max
Glyma.02G151500 10.0kb downstream 10.0kb downstream 12043 true Chr02: 15586732-15598774 Glycine max
Glyma.02G151500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15588775-15598774 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
122305138 5265 Fabidae View MSA
124066406 5270 Rosid View MSA
123738501 5271 Pentapetalae View MSA
122791518 5272 Eudicot View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3011 0.0 27.7029   High
cufflinks 3.58824 0.0 10.669    
cufflinks 1.25454 0.0 4.29588   Low
cufflinks 3.09238 0.0 9.38033    
cufflinks 4.44778 0.0 12.7803    
cufflinks 1.35181 0.0 4.57113   Low
cufflinks 5.60613 0.0 15.7262    
cufflinks 4.09525 0.0 11.9376    
cufflinks 2.72917 0.0 8.39815    
cufflinks 1.75        
cufflinks 0.512       Low
cufflinks 2.943        
cufflinks 3.085        
cufflinks 4.139       High
cufflinks 0.729       Low
cufflinks 2.288        
cufflinks 1.998        
cufflinks 2.071        
cufflinks 4.464       High
cufflinks 1.858        
cufflinks 0.511       Low
cufflinks 2.02        
cufflinks 3.89       High
cufflinks 0.55       Low
cufflinks 2.23        
cufflinks 1.096        

0 Strain