Gene : Glyma.02G149100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  1491
Name:  ? Glyma.02G149100 Secondary Identifier:  ? PAC:30509814
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-4081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G149100 0.5kb upstream 0.5kb upstream 3760 true Chr02: 15341042-15344801 Glycine max
Glyma.02G149100 0.5kb upstream 0.5kb upstream 500 false Chr02: 15344302-15344801 Glycine max
Glyma.02G149100 0.5kb downstream 0.5kb downstream 3760 true Chr02: 15340542-15344301 Glycine max
Glyma.02G149100 0.5kb downstream 0.5kb downstream 500 false Chr02: 15340542-15341041 Glycine max
Glyma.02G149100 1.0kb upstream 1.0kb upstream 4260 true Chr02: 15341042-15345301 Glycine max
Glyma.02G149100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15344302-15345301 Glycine max
Glyma.02G149100 1.0kb downstream 1.0kb downstream 4260 true Chr02: 15340042-15344301 Glycine max
Glyma.02G149100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15340042-15341041 Glycine max
Glyma.02G149100 2.0kb upstream 2.0kb upstream 5260 true Chr02: 15341042-15346301 Glycine max
Glyma.02G149100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15344302-15346301 Glycine max
Glyma.02G149100 2.0kb downstream 2.0kb downstream 5260 true Chr02: 15339042-15344301 Glycine max
Glyma.02G149100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15339042-15341041 Glycine max
Glyma.02G149100 5.0kb upstream 5.0kb upstream 8260 true Chr02: 15341042-15349301 Glycine max
Glyma.02G149100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15344302-15349301 Glycine max
Glyma.02G149100 5.0kb downstream 5.0kb downstream 8260 true Chr02: 15336042-15344301 Glycine max
Glyma.02G149100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15336042-15341041 Glycine max
Glyma.02G149100 10.0kb upstream 10.0kb upstream 13260 true Chr02: 15341042-15354301 Glycine max
Glyma.02G149100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15344302-15354301 Glycine max
Glyma.02G149100 10.0kb downstream 10.0kb downstream 13260 true Chr02: 15331042-15344301 Glycine max
Glyma.02G149100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15331042-15341041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122297637 5265 Fabidae View MSA
124036094 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0352691 0.0 0.152339 Low  
cufflinks 0.0765759 0.0 0.312756 Low  
cufflinks 0.0223446 0.0 0.100265 Low  
cufflinks 8.46475 0.0 24.5428    
cufflinks 961.593 0.0 5002.96 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.163417 0.0 0.647553 Low  
cufflinks 8.99458 0.0 25.8505    
cufflinks 0.089     Low  
cufflinks 0.96        
cufflinks 0.005     Low Low
cufflinks 15.341     High High
cufflinks 1.993       High
cufflinks 0.089        
cufflinks 0.059     Low  
cufflinks 3.202       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.05     Low  
cufflinks 0.443        
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.192        
cufflinks 0.067     Low  
cufflinks 1.239        

0 Strain