Gene : Glyma.02G146600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  1466
Name:  ? Glyma.02G146600 Secondary Identifier:  ? PAC:30509596
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G146600 0.5kb upstream 0.5kb upstream 3134 true Chr02: 15131158-15134291 Glycine max
Glyma.02G146600 0.5kb upstream 0.5kb upstream 500 false Chr02: 15131158-15131657 Glycine max
Glyma.02G146600 0.5kb downstream 0.5kb downstream 3134 true Chr02: 15131658-15134791 Glycine max
Glyma.02G146600 0.5kb downstream 0.5kb downstream 500 false Chr02: 15134292-15134791 Glycine max
Glyma.02G146600 1.0kb upstream 1.0kb upstream 3634 true Chr02: 15130658-15134291 Glycine max
Glyma.02G146600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15130658-15131657 Glycine max
Glyma.02G146600 1.0kb downstream 1.0kb downstream 3634 true Chr02: 15131658-15135291 Glycine max
Glyma.02G146600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15134292-15135291 Glycine max
Glyma.02G146600 2.0kb upstream 2.0kb upstream 4634 true Chr02: 15129658-15134291 Glycine max
Glyma.02G146600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15129658-15131657 Glycine max
Glyma.02G146600 2.0kb downstream 2.0kb downstream 4634 true Chr02: 15131658-15136291 Glycine max
Glyma.02G146600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15134292-15136291 Glycine max
Glyma.02G146600 5.0kb upstream 5.0kb upstream 7634 true Chr02: 15126658-15134291 Glycine max
Glyma.02G146600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15126658-15131657 Glycine max
Glyma.02G146600 5.0kb downstream 5.0kb downstream 7634 true Chr02: 15131658-15139291 Glycine max
Glyma.02G146600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15134292-15139291 Glycine max
Glyma.02G146600 10.0kb upstream 10.0kb upstream 12634 true Chr02: 15121658-15134291 Glycine max
Glyma.02G146600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15121658-15131657 Glycine max
Glyma.02G146600 10.0kb downstream 10.0kb downstream 12634 true Chr02: 15131658-15144291 Glycine max
Glyma.02G146600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15134292-15144291 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304024 5265 Fabidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29377 0.0 19.8025    
cufflinks 4.23748 0.0 12.0828   Low
cufflinks 4.96761 0.0 13.9336   Low
cufflinks 6.90935 0.0 18.824    
cufflinks 7.37643 0.0 19.9962    
cufflinks 6.17703 0.0 16.9645    
cufflinks 7.02907 0.0 19.156    
cufflinks 6.47608 0.0 17.7294    
cufflinks 6.63997 0.0 18.154    
cufflinks 5.157       Low
cufflinks 8.231     High  
cufflinks 7.191        
cufflinks 6.595        
cufflinks 8.576     High  
cufflinks 7.369     High  
cufflinks 6.133        
cufflinks 9.578     High High
cufflinks 6.156        
cufflinks 5.242       Low
cufflinks 5.635        
cufflinks 9.705     High High
cufflinks 5.907        
cufflinks 5.719        
cufflinks 8.536     High  
cufflinks 4.95       Low
cufflinks 11.655     High High

0 Strain