Gene : Glyma.02G174100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF603 - PROTEIN PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 Genomic Order:  1741
Name:  ? Glyma.02G174100 Secondary Identifier:  ? PAC:30507399
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G174100 0.5kb upstream 0.5kb upstream 17694 true Chr02: 27786291-27803984 Glycine max
Glyma.02G174100 0.5kb upstream 0.5kb upstream 500 false Chr02: 27803485-27803984 Glycine max
Glyma.02G174100 0.5kb downstream 0.5kb downstream 17694 true Chr02: 27785791-27803484 Glycine max
Glyma.02G174100 0.5kb downstream 0.5kb downstream 500 false Chr02: 27785791-27786290 Glycine max
Glyma.02G174100 1.0kb upstream 1.0kb upstream 18194 true Chr02: 27786291-27804484 Glycine max
Glyma.02G174100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27803485-27804484 Glycine max
Glyma.02G174100 1.0kb downstream 1.0kb downstream 18194 true Chr02: 27785291-27803484 Glycine max
Glyma.02G174100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27785291-27786290 Glycine max
Glyma.02G174100 2.0kb upstream 2.0kb upstream 19194 true Chr02: 27786291-27805484 Glycine max
Glyma.02G174100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27803485-27805484 Glycine max
Glyma.02G174100 2.0kb downstream 2.0kb downstream 19194 true Chr02: 27784291-27803484 Glycine max
Glyma.02G174100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27784291-27786290 Glycine max
Glyma.02G174100 5.0kb upstream 5.0kb upstream 22194 true Chr02: 27786291-27808484 Glycine max
Glyma.02G174100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27803485-27808484 Glycine max
Glyma.02G174100 5.0kb downstream 5.0kb downstream 22194 true Chr02: 27781291-27803484 Glycine max
Glyma.02G174100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27781291-27786290 Glycine max
Glyma.02G174100 10.0kb upstream 10.0kb upstream 27194 true Chr02: 27786291-27813484 Glycine max
Glyma.02G174100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27803485-27813484 Glycine max
Glyma.02G174100 10.0kb downstream 10.0kb downstream 27194 true Chr02: 27776291-27803484 Glycine max
Glyma.02G174100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27776291-27786290 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303183 5265 Fabidae View MSA
124061293 5270 Rosid View MSA
123739512 5271 Pentapetalae View MSA
122790205 5272 Eudicot View MSA
122045682 5273 Angiosperm View MSA
121347848 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85626 0.0 9.93457    
cufflinks 3.23679 0.0 11.083    
cufflinks 3.00089 0.0 8.95665    
cufflinks 2.70748 0.0 8.14242    
cufflinks 2.37607 0.0 8.3922    
cufflinks 2.06163 0.0 7.53554   Low
cufflinks 3.5634 0.0 12.2338   High
cufflinks 2.43833 0.0 8.59949    
cufflinks 2.90515 0.0 8.70663    
cufflinks 0.458       Low
cufflinks 0.609        
cufflinks 0.67        
cufflinks 0.45       Low
cufflinks 0.488        
cufflinks 0.75       High
cufflinks 0.712        
cufflinks 0.382       Low
cufflinks 0.735        
cufflinks 0.789       High
cufflinks 0.656        
cufflinks 0.44       Low
cufflinks 0.703        
cufflinks 0.638        
cufflinks 0.504        
cufflinks 0.733        
cufflinks 0.625        

0 Strain