Gene : Glyma.02G161200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC Genomic Order:  1612
Name:  ? Glyma.02G161200 Secondary Identifier:  ? PAC:30507085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G161200 0.5kb upstream 0.5kb upstream 8794 true Chr02: 19686830-19695623 Glycine max
Glyma.02G161200 0.5kb upstream 0.5kb upstream 500 false Chr02: 19686830-19687329 Glycine max
Glyma.02G161200 0.5kb downstream 0.5kb downstream 8794 true Chr02: 19687330-19696123 Glycine max
Glyma.02G161200 0.5kb downstream 0.5kb downstream 500 false Chr02: 19695624-19696123 Glycine max
Glyma.02G161200 1.0kb upstream 1.0kb upstream 9294 true Chr02: 19686330-19695623 Glycine max
Glyma.02G161200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19686330-19687329 Glycine max
Glyma.02G161200 1.0kb downstream 1.0kb downstream 9294 true Chr02: 19687330-19696623 Glycine max
Glyma.02G161200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19695624-19696623 Glycine max
Glyma.02G161200 2.0kb upstream 2.0kb upstream 10294 true Chr02: 19685330-19695623 Glycine max
Glyma.02G161200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19685330-19687329 Glycine max
Glyma.02G161200 2.0kb downstream 2.0kb downstream 10294 true Chr02: 19687330-19697623 Glycine max
Glyma.02G161200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19695624-19697623 Glycine max
Glyma.02G161200 5.0kb upstream 5.0kb upstream 13294 true Chr02: 19682330-19695623 Glycine max
Glyma.02G161200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19682330-19687329 Glycine max
Glyma.02G161200 5.0kb downstream 5.0kb downstream 13294 true Chr02: 19687330-19700623 Glycine max
Glyma.02G161200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19695624-19700623 Glycine max
Glyma.02G161200 10.0kb upstream 10.0kb upstream 18294 true Chr02: 19677330-19695623 Glycine max
Glyma.02G161200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19677330-19687329 Glycine max
Glyma.02G161200 10.0kb downstream 10.0kb downstream 18294 true Chr02: 19687330-19705623 Glycine max
Glyma.02G161200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19695624-19705623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310553 5265 Fabidae View MSA
124062487 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.784037 0.0 3.22576    
cufflinks 0.983497 0.0 3.78147    
cufflinks 1.04577 0.0 3.94278    
cufflinks 0.964641 0.0 3.76686    
cufflinks 1.33818 0.0 4.84647    
cufflinks 2.00821 0.0 6.26764   High
cufflinks 0.722669 0.0 3.09643   Low
cufflinks 0.888409 0.0 3.50247    
cufflinks 1.70084 0.0 5.67003   High
cufflinks 0.419        
cufflinks 0.623        
cufflinks 0.768        
cufflinks 0.525        
cufflinks 0.341        
cufflinks 0.881       High
cufflinks 0.258       Low
cufflinks 2.004       High
cufflinks 0.58        
cufflinks 0.377        
cufflinks 0.232       Low
cufflinks 0.356        
cufflinks 0.247       Low
cufflinks 0.428        
cufflinks 0.412        
cufflinks 0.203       Low
cufflinks 0.664        

0 Strain