Gene : Glyma.02G160500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22814:SF73 - COPPER TRANSPORT PROTEIN CCH Genomic Order:  1605
Name:  ? Glyma.02G160500 Secondary Identifier:  ? PAC:30507510
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G160500 0.5kb upstream 0.5kb upstream 4397 true Chr02: 18680544-18684940 Glycine max
Glyma.02G160500 0.5kb upstream 0.5kb upstream 500 false Chr02: 18684441-18684940 Glycine max
Glyma.02G160500 0.5kb downstream 0.5kb downstream 4397 true Chr02: 18680044-18684440 Glycine max
Glyma.02G160500 0.5kb downstream 0.5kb downstream 500 false Chr02: 18680044-18680543 Glycine max
Glyma.02G160500 1.0kb upstream 1.0kb upstream 4897 true Chr02: 18680544-18685440 Glycine max
Glyma.02G160500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18684441-18685440 Glycine max
Glyma.02G160500 1.0kb downstream 1.0kb downstream 4897 true Chr02: 18679544-18684440 Glycine max
Glyma.02G160500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18679544-18680543 Glycine max
Glyma.02G160500 2.0kb upstream 2.0kb upstream 5897 true Chr02: 18680544-18686440 Glycine max
Glyma.02G160500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18684441-18686440 Glycine max
Glyma.02G160500 2.0kb downstream 2.0kb downstream 5897 true Chr02: 18678544-18684440 Glycine max
Glyma.02G160500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18678544-18680543 Glycine max
Glyma.02G160500 5.0kb upstream 5.0kb upstream 8897 true Chr02: 18680544-18689440 Glycine max
Glyma.02G160500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18684441-18689440 Glycine max
Glyma.02G160500 5.0kb downstream 5.0kb downstream 8897 true Chr02: 18675544-18684440 Glycine max
Glyma.02G160500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18675544-18680543 Glycine max
Glyma.02G160500 10.0kb upstream 10.0kb upstream 13897 true Chr02: 18680544-18694440 Glycine max
Glyma.02G160500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18684441-18694440 Glycine max
Glyma.02G160500 10.0kb downstream 10.0kb downstream 13897 true Chr02: 18670544-18684440 Glycine max
Glyma.02G160500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18670544-18680543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122312421 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 239.089 0.0 1069.4 High  
cufflinks 48.7026 0.0 169.238 High  
cufflinks 427.97 0.0 3285.61 High High
cufflinks 255.187 0.0 1439.84 High  
cufflinks 100.802 0.0 453.854 High  
cufflinks 16.4559 0.0 62.481   Low
cufflinks 119.121 0.0 480.859 High  
cufflinks 387.486 0.0 2744.26 High High
cufflinks 111.4 0.0 438.729 High  
cufflinks 8.522     High  
cufflinks 9.019     High  
cufflinks 16.82     High High
cufflinks 1.629       Low
cufflinks 1.467       Low
cufflinks 3.373        
cufflinks 10.435     High  
cufflinks 9.96     High  
cufflinks 11.009     High  
cufflinks 2.893       Low
cufflinks 7.659     High  
cufflinks 5.625        
cufflinks 6.376        
cufflinks 4.123        
cufflinks 9.146     High  
cufflinks 6.853        
cufflinks 7.016     High  

0 Strain