Gene : Glyma.18G289900 G. max Wm82.a2.v1
Defline:  (1 of 83) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  2899
Name:  ? Glyma.18G289900 Secondary Identifier:  ? PAC:30554850
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G289900 0.5kb upstream 0.5kb upstream 1834 true Chr18: 56927768-56929601 Glycine max
Glyma.18G289900 0.5kb upstream 0.5kb upstream 500 false Chr18: 56927768-56928267 Glycine max
Glyma.18G289900 0.5kb downstream 0.5kb downstream 1834 true Chr18: 56928268-56930101 Glycine max
Glyma.18G289900 0.5kb downstream 0.5kb downstream 500 false Chr18: 56929602-56930101 Glycine max
Glyma.18G289900 1.0kb upstream 1.0kb upstream 2334 true Chr18: 56927268-56929601 Glycine max
Glyma.18G289900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56927268-56928267 Glycine max
Glyma.18G289900 1.0kb downstream 1.0kb downstream 2334 true Chr18: 56928268-56930601 Glycine max
Glyma.18G289900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56929602-56930601 Glycine max
Glyma.18G289900 2.0kb upstream 2.0kb upstream 3334 true Chr18: 56926268-56929601 Glycine max
Glyma.18G289900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56926268-56928267 Glycine max
Glyma.18G289900 2.0kb downstream 2.0kb downstream 3334 true Chr18: 56928268-56931601 Glycine max
Glyma.18G289900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56929602-56931601 Glycine max
Glyma.18G289900 5.0kb upstream 5.0kb upstream 6334 true Chr18: 56923268-56929601 Glycine max
Glyma.18G289900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56923268-56928267 Glycine max
Glyma.18G289900 5.0kb downstream 5.0kb downstream 6334 true Chr18: 56928268-56934601 Glycine max
Glyma.18G289900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56929602-56934601 Glycine max
Glyma.18G289900 10.0kb upstream 10.0kb upstream 11334 true Chr18: 56918268-56929601 Glycine max
Glyma.18G289900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56918268-56928267 Glycine max
Glyma.18G289900 10.0kb downstream 10.0kb downstream 11334 true Chr18: 56928268-56939601 Glycine max
Glyma.18G289900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56929602-56939601 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305983 5265 Fabidae View MSA
124069880 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.64067 0.0 27.4484    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.23372 0.0 0.935709   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.4725 0.0 42.751    
cufflinks 106.077 0.0 288.078 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.115899 0.0 0.480964 Low Low
cufflinks 14.4581 0.0 42.5347    
cufflinks 0.012     Low Low
cufflinks 17.286     High  
cufflinks 0.287        
cufflinks 52.253     High High
cufflinks 46.56     High High
cufflinks 1.003        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.438        
cufflinks 0.008     Low Low
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.314     High  
cufflinks 0.023     Low Low
cufflinks 0.012     Low Low
cufflinks 37.365     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 31.328     High  

0 Strain