Gene : Glyma.02G167900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  1679
Name:  ? Glyma.02G167900 Secondary Identifier:  ? PAC:30509765
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G167900 0.5kb upstream 0.5kb upstream 3417 true Chr02: 25844576-25847992 Glycine max
Glyma.02G167900 0.5kb upstream 0.5kb upstream 500 false Chr02: 25847493-25847992 Glycine max
Glyma.02G167900 0.5kb downstream 0.5kb downstream 3417 true Chr02: 25844076-25847492 Glycine max
Glyma.02G167900 0.5kb downstream 0.5kb downstream 500 false Chr02: 25844076-25844575 Glycine max
Glyma.02G167900 1.0kb upstream 1.0kb upstream 3917 true Chr02: 25844576-25848492 Glycine max
Glyma.02G167900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25847493-25848492 Glycine max
Glyma.02G167900 1.0kb downstream 1.0kb downstream 3917 true Chr02: 25843576-25847492 Glycine max
Glyma.02G167900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25843576-25844575 Glycine max
Glyma.02G167900 2.0kb upstream 2.0kb upstream 4917 true Chr02: 25844576-25849492 Glycine max
Glyma.02G167900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25847493-25849492 Glycine max
Glyma.02G167900 2.0kb downstream 2.0kb downstream 4917 true Chr02: 25842576-25847492 Glycine max
Glyma.02G167900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25842576-25844575 Glycine max
Glyma.02G167900 5.0kb upstream 5.0kb upstream 7917 true Chr02: 25844576-25852492 Glycine max
Glyma.02G167900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25847493-25852492 Glycine max
Glyma.02G167900 5.0kb downstream 5.0kb downstream 7917 true Chr02: 25839576-25847492 Glycine max
Glyma.02G167900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25839576-25844575 Glycine max
Glyma.02G167900 10.0kb upstream 10.0kb upstream 12917 true Chr02: 25844576-25857492 Glycine max
Glyma.02G167900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25847493-25857492 Glycine max
Glyma.02G167900 10.0kb downstream 10.0kb downstream 12917 true Chr02: 25834576-25847492 Glycine max
Glyma.02G167900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25834576-25844575 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 139.76 0.0 597.601 High  
cufflinks 186.831 0.0 758.857 High  
cufflinks 87.627 0.0 332.827 High Low
cufflinks 99.9704 0.0 389.41 High Low
cufflinks 284.916 0.0 1401.92 High High
cufflinks 194.866 0.0 811.743 High  
cufflinks 186.399 0.0 761.818 High  
cufflinks 155.926 0.0 598.651 High  
cufflinks 194.457 0.0 810.855 High  
cufflinks 22.718     High  
cufflinks 6.435     High Low
cufflinks 15.629     High  
cufflinks 58.554     High High
cufflinks 84.226     High High
cufflinks 9.932     High Low
cufflinks 25.327     High  
cufflinks 16.28     High  
cufflinks 17.645     High  
cufflinks 28.035     High  
cufflinks 17.683     High  
cufflinks 12.417     High  
cufflinks 19.071     High  
cufflinks 26.756     High  
cufflinks 8.576     High Low
cufflinks 22.703     High  
cufflinks 18.43     High  

0 Strain