Gene : Glyma.02G200700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  2007
Name:  ? Glyma.02G200700 Secondary Identifier:  ? PAC:30508813
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G200700 0.5kb upstream 0.5kb upstream 24301 true Chr02: 38435454-38459754 Glycine max
Glyma.02G200700 0.5kb upstream 0.5kb upstream 500 false Chr02: 38459255-38459754 Glycine max
Glyma.02G200700 0.5kb downstream 0.5kb downstream 24301 true Chr02: 38434954-38459254 Glycine max
Glyma.02G200700 0.5kb downstream 0.5kb downstream 500 false Chr02: 38434954-38435453 Glycine max
Glyma.02G200700 1.0kb upstream 1.0kb upstream 24801 true Chr02: 38435454-38460254 Glycine max
Glyma.02G200700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38459255-38460254 Glycine max
Glyma.02G200700 1.0kb downstream 1.0kb downstream 24801 true Chr02: 38434454-38459254 Glycine max
Glyma.02G200700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38434454-38435453 Glycine max
Glyma.02G200700 2.0kb upstream 2.0kb upstream 25801 true Chr02: 38435454-38461254 Glycine max
Glyma.02G200700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38459255-38461254 Glycine max
Glyma.02G200700 2.0kb downstream 2.0kb downstream 25801 true Chr02: 38433454-38459254 Glycine max
Glyma.02G200700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38433454-38435453 Glycine max
Glyma.02G200700 5.0kb upstream 5.0kb upstream 28801 true Chr02: 38435454-38464254 Glycine max
Glyma.02G200700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38459255-38464254 Glycine max
Glyma.02G200700 5.0kb downstream 5.0kb downstream 28801 true Chr02: 38430454-38459254 Glycine max
Glyma.02G200700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38430454-38435453 Glycine max
Glyma.02G200700 10.0kb upstream 10.0kb upstream 33801 true Chr02: 38435454-38469254 Glycine max
Glyma.02G200700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38459255-38469254 Glycine max
Glyma.02G200700 10.0kb downstream 10.0kb downstream 33801 true Chr02: 38425454-38459254 Glycine max
Glyma.02G200700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38425454-38435453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304547 5265 Fabidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9662 0.0 61.1038   High
cufflinks 5.39581 0.0 26.6875    
cufflinks 7.02892 0.0 35.5011    
cufflinks 4.1998 0.0 24.0122    
cufflinks 3.54701 0.0 16.2765    
cufflinks 3.0152 0.0 13.108   Low
cufflinks 8.04138 0.0 47.9439    
cufflinks 4.28021 0.0 21.4843    
cufflinks 2.67723 0.0 17.7961   Low
cufflinks 0.058     Low  
cufflinks 0.044     Low  
cufflinks 0.082     Low  
cufflinks 0.042     Low  
cufflinks 0.043     Low  
cufflinks 0.068        
cufflinks 0.205       High
cufflinks 0.04     Low  
cufflinks 0.067     Low  
cufflinks 0.112        
cufflinks 0.183       High
cufflinks 0.041     Low  
cufflinks 0.191       High
cufflinks 0.158       High
cufflinks 0.048     Low  
cufflinks 0.234       High
cufflinks 0.035     Low Low

0 Strain