Gene : Glyma.02G213400 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  2134
Name:  ? Glyma.02G213400 Secondary Identifier:  ? PAC:30506805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G213400 0.5kb upstream 0.5kb upstream 7252 true Chr02: 39945897-39953148 Glycine max
Glyma.02G213400 0.5kb upstream 0.5kb upstream 500 false Chr02: 39945897-39946396 Glycine max
Glyma.02G213400 0.5kb downstream 0.5kb downstream 7252 true Chr02: 39946397-39953648 Glycine max
Glyma.02G213400 0.5kb downstream 0.5kb downstream 500 false Chr02: 39953149-39953648 Glycine max
Glyma.02G213400 1.0kb upstream 1.0kb upstream 7752 true Chr02: 39945397-39953148 Glycine max
Glyma.02G213400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39945397-39946396 Glycine max
Glyma.02G213400 1.0kb downstream 1.0kb downstream 7752 true Chr02: 39946397-39954148 Glycine max
Glyma.02G213400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39953149-39954148 Glycine max
Glyma.02G213400 2.0kb upstream 2.0kb upstream 8752 true Chr02: 39944397-39953148 Glycine max
Glyma.02G213400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39944397-39946396 Glycine max
Glyma.02G213400 2.0kb downstream 2.0kb downstream 8752 true Chr02: 39946397-39955148 Glycine max
Glyma.02G213400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39953149-39955148 Glycine max
Glyma.02G213400 5.0kb upstream 5.0kb upstream 11752 true Chr02: 39941397-39953148 Glycine max
Glyma.02G213400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39941397-39946396 Glycine max
Glyma.02G213400 5.0kb downstream 5.0kb downstream 11752 true Chr02: 39946397-39958148 Glycine max
Glyma.02G213400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39953149-39958148 Glycine max
Glyma.02G213400 10.0kb upstream 10.0kb upstream 16752 true Chr02: 39936397-39953148 Glycine max
Glyma.02G213400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39936397-39946396 Glycine max
Glyma.02G213400 10.0kb downstream 10.0kb downstream 16752 true Chr02: 39946397-39963148 Glycine max
Glyma.02G213400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39953149-39963148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296337 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.35283 0.0 6.80826   Low
cufflinks 2.28361 0.0 6.63084   Low
cufflinks 5.11114 0.0 13.7865   High
cufflinks 3.52194 0.0 9.75569    
cufflinks 2.78815 0.0 7.91494    
cufflinks 3.92575 0.0 10.7792    
cufflinks 3.00015 0.0 8.45341    
cufflinks 3.31864 0.0 9.23592    
cufflinks 5.38477 0.0 14.5076   High
cufflinks 1.3        
cufflinks 3.284       High
cufflinks 2.404        
cufflinks 1.571        
cufflinks 1.388        
cufflinks 7.149     High High
cufflinks 1.448        
cufflinks 1.146       Low
cufflinks 2.02        
cufflinks 2.094        
cufflinks 1.331        
cufflinks 2.486        
cufflinks 1.755        
cufflinks 1.409        
cufflinks 3.844       High
cufflinks 1.211       Low
cufflinks 2.238        

0 Strain