Gene : Glyma.02G213800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF120 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  2138
Name:  ? Glyma.02G213800 Secondary Identifier:  ? PAC:30510281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G213800 0.5kb upstream 0.5kb upstream 2058 true Chr02: 39989698-39991755 Glycine max
Glyma.02G213800 0.5kb upstream 0.5kb upstream 500 false Chr02: 39991256-39991755 Glycine max
Glyma.02G213800 0.5kb downstream 0.5kb downstream 2058 true Chr02: 39989198-39991255 Glycine max
Glyma.02G213800 0.5kb downstream 0.5kb downstream 500 false Chr02: 39989198-39989697 Glycine max
Glyma.02G213800 1.0kb upstream 1.0kb upstream 2558 true Chr02: 39989698-39992255 Glycine max
Glyma.02G213800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39991256-39992255 Glycine max
Glyma.02G213800 1.0kb downstream 1.0kb downstream 2558 true Chr02: 39988698-39991255 Glycine max
Glyma.02G213800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39988698-39989697 Glycine max
Glyma.02G213800 2.0kb upstream 2.0kb upstream 3558 true Chr02: 39989698-39993255 Glycine max
Glyma.02G213800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39991256-39993255 Glycine max
Glyma.02G213800 2.0kb downstream 2.0kb downstream 3558 true Chr02: 39987698-39991255 Glycine max
Glyma.02G213800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39987698-39989697 Glycine max
Glyma.02G213800 5.0kb upstream 5.0kb upstream 6558 true Chr02: 39989698-39996255 Glycine max
Glyma.02G213800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39991256-39996255 Glycine max
Glyma.02G213800 5.0kb downstream 5.0kb downstream 6558 true Chr02: 39984698-39991255 Glycine max
Glyma.02G213800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39984698-39989697 Glycine max
Glyma.02G213800 10.0kb upstream 10.0kb upstream 11558 true Chr02: 39989698-40001255 Glycine max
Glyma.02G213800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39991256-40001255 Glycine max
Glyma.02G213800 10.0kb downstream 10.0kb downstream 11558 true Chr02: 39979698-39991255 Glycine max
Glyma.02G213800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39979698-39989697 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300530 5265 Fabidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0145119 0.0 0.0656303 Low Low
cufflinks 1.81176 0.0 6.19434   High
cufflinks 0.685612 0.0 2.52416    
cufflinks 2.07606 0.0 6.96778   High
cufflinks 0.0704931 0.0 0.284066 Low  
cufflinks 0.162766 0.0 0.63706 Low  
cufflinks 1.26331 0.0 4.4343    
cufflinks 0.179619 0.0 0.701332 Low  
cufflinks 0.0439441 0.0 0.181903 Low  
cufflinks 0.009     Low Low
cufflinks 0.287        
cufflinks 0.333        
cufflinks 0.032     Low Low
cufflinks 0.156        
cufflinks 0.647        
cufflinks 1.02        
cufflinks 0.119        
cufflinks 0.434        
cufflinks 1.045       High
cufflinks 0.395        
cufflinks 0.609        
cufflinks 0.404        
cufflinks 0.408        
cufflinks 0.38        
cufflinks 0.964        
cufflinks 0.547        

0 Strain