Gene : Glyma.02G198000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  1980
Name:  ? Glyma.02G198000 Secondary Identifier:  ? PAC:30506963
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G198000 0.5kb upstream 0.5kb upstream 5330 true Chr02: 37806790-37812119 Glycine max
Glyma.02G198000 0.5kb upstream 0.5kb upstream 500 false Chr02: 37811620-37812119 Glycine max
Glyma.02G198000 0.5kb downstream 0.5kb downstream 5330 true Chr02: 37806290-37811619 Glycine max
Glyma.02G198000 0.5kb downstream 0.5kb downstream 500 false Chr02: 37806290-37806789 Glycine max
Glyma.02G198000 1.0kb upstream 1.0kb upstream 5830 true Chr02: 37806790-37812619 Glycine max
Glyma.02G198000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37811620-37812619 Glycine max
Glyma.02G198000 1.0kb downstream 1.0kb downstream 5830 true Chr02: 37805790-37811619 Glycine max
Glyma.02G198000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37805790-37806789 Glycine max
Glyma.02G198000 2.0kb upstream 2.0kb upstream 6830 true Chr02: 37806790-37813619 Glycine max
Glyma.02G198000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37811620-37813619 Glycine max
Glyma.02G198000 2.0kb downstream 2.0kb downstream 6830 true Chr02: 37804790-37811619 Glycine max
Glyma.02G198000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37804790-37806789 Glycine max
Glyma.02G198000 5.0kb upstream 5.0kb upstream 9830 true Chr02: 37806790-37816619 Glycine max
Glyma.02G198000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37811620-37816619 Glycine max
Glyma.02G198000 5.0kb downstream 5.0kb downstream 9830 true Chr02: 37801790-37811619 Glycine max
Glyma.02G198000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37801790-37806789 Glycine max
Glyma.02G198000 10.0kb upstream 10.0kb upstream 14830 true Chr02: 37806790-37821619 Glycine max
Glyma.02G198000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37811620-37821619 Glycine max
Glyma.02G198000 10.0kb downstream 10.0kb downstream 14830 true Chr02: 37796790-37811619 Glycine max
Glyma.02G198000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37796790-37806789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306559 5265 Fabidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.790574 0.0 2.66699    
cufflinks 2.39991 0.0 6.95747    
cufflinks 2.61776 0.0 7.50571    
cufflinks 0.793814 0.0 2.67197    
cufflinks 2.3767 0.0 6.89797    
cufflinks 0.431871 0.0 1.54033   Low
cufflinks 2.66198 0.0 7.6152    
cufflinks 3.22543 0.0 9.02422    
cufflinks 2.1765 0.0 6.38666    
cufflinks 2.311        
cufflinks 2.67        
cufflinks 3.015        
cufflinks 2.915        
cufflinks 3.443        
cufflinks 1.358       Low
cufflinks 4.959       High
cufflinks 0.427       Low
cufflinks 2.882        
cufflinks 1.52        
cufflinks 4.553        
cufflinks 3.274        
cufflinks 5.041       High
cufflinks 3.508        
cufflinks 2.246        
cufflinks 4.231        
cufflinks 2.328        

0 Strain