Gene : Glyma.02G212500 G. max Wm82.a2.v1
Defline:  (1 of 253) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  2125
Name:  ? Glyma.02G212500 Secondary Identifier:  ? PAC:30506904
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G212500 0.5kb upstream 0.5kb upstream 3947 true Chr02: 39851468-39855414 Glycine max
Glyma.02G212500 0.5kb upstream 0.5kb upstream 500 false Chr02: 39854915-39855414 Glycine max
Glyma.02G212500 0.5kb downstream 0.5kb downstream 3947 true Chr02: 39850968-39854914 Glycine max
Glyma.02G212500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39850968-39851467 Glycine max
Glyma.02G212500 1.0kb upstream 1.0kb upstream 4447 true Chr02: 39851468-39855914 Glycine max
Glyma.02G212500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39854915-39855914 Glycine max
Glyma.02G212500 1.0kb downstream 1.0kb downstream 4447 true Chr02: 39850468-39854914 Glycine max
Glyma.02G212500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39850468-39851467 Glycine max
Glyma.02G212500 2.0kb upstream 2.0kb upstream 5447 true Chr02: 39851468-39856914 Glycine max
Glyma.02G212500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39854915-39856914 Glycine max
Glyma.02G212500 2.0kb downstream 2.0kb downstream 5447 true Chr02: 39849468-39854914 Glycine max
Glyma.02G212500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39849468-39851467 Glycine max
Glyma.02G212500 5.0kb upstream 5.0kb upstream 8447 true Chr02: 39851468-39859914 Glycine max
Glyma.02G212500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39854915-39859914 Glycine max
Glyma.02G212500 5.0kb downstream 5.0kb downstream 8447 true Chr02: 39846468-39854914 Glycine max
Glyma.02G212500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39846468-39851467 Glycine max
Glyma.02G212500 10.0kb upstream 10.0kb upstream 13447 true Chr02: 39851468-39864914 Glycine max
Glyma.02G212500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39854915-39864914 Glycine max
Glyma.02G212500 10.0kb downstream 10.0kb downstream 13447 true Chr02: 39841468-39854914 Glycine max
Glyma.02G212500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39841468-39851467 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121609642 5273 Angiosperm Singleton cluster - no MSA
122241957 5265 Fabidae Singleton cluster - no MSA
123986733 5270 Rosid Singleton cluster - no MSA
123562063 5271 Pentapetalae Singleton cluster - no MSA
122596851 5272 Eudicot Singleton cluster - no MSA
123429067 5275 Viridiplantae View MSA
121349167 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.2224 0.0 92.0 High  
cufflinks 20.331 0.0 73.849 High  
cufflinks 53.6102 0.0 182.048 High High
cufflinks 24.2997 0.0 85.3714 High  
cufflinks 34.7187 0.0 118.102 High  
cufflinks 45.2948 0.0 152.948 High High
cufflinks 14.9523 0.0 58.1295   Low
cufflinks 23.3503 0.0 82.6748 High  
cufflinks 37.1403 0.0 125.787 High  
cufflinks 0.868       Low
cufflinks 3.006       High
cufflinks 3.916       High
cufflinks 2.778       High
cufflinks 1.687        
cufflinks 1.58        
cufflinks 1.162        
cufflinks 1.116        
cufflinks 1.738        
cufflinks 1.437        
cufflinks 1.306        
cufflinks 2.51        
cufflinks 1.517        
cufflinks 1.015       Low
cufflinks 3.213       High
cufflinks 1.231        
cufflinks 1.553        

0 Strain