Gene : Glyma.02G207800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  2078
Name:  ? Glyma.02G207800 Secondary Identifier:  ? PAC:30510930
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCOSE1PMETAB-PWY Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  
Gmax PWY-7238 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G207800 0.5kb upstream 0.5kb upstream 6858 true Chr02: 39259619-39266476 Glycine max
Glyma.02G207800 0.5kb upstream 0.5kb upstream 500 false Chr02: 39259619-39260118 Glycine max
Glyma.02G207800 0.5kb downstream 0.5kb downstream 6858 true Chr02: 39260119-39266976 Glycine max
Glyma.02G207800 0.5kb downstream 0.5kb downstream 500 false Chr02: 39266477-39266976 Glycine max
Glyma.02G207800 1.0kb upstream 1.0kb upstream 7358 true Chr02: 39259119-39266476 Glycine max
Glyma.02G207800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39259119-39260118 Glycine max
Glyma.02G207800 1.0kb downstream 1.0kb downstream 7358 true Chr02: 39260119-39267476 Glycine max
Glyma.02G207800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39266477-39267476 Glycine max
Glyma.02G207800 2.0kb upstream 2.0kb upstream 8358 true Chr02: 39258119-39266476 Glycine max
Glyma.02G207800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39258119-39260118 Glycine max
Glyma.02G207800 2.0kb downstream 2.0kb downstream 8358 true Chr02: 39260119-39268476 Glycine max
Glyma.02G207800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39266477-39268476 Glycine max
Glyma.02G207800 5.0kb upstream 5.0kb upstream 11358 true Chr02: 39255119-39266476 Glycine max
Glyma.02G207800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39255119-39260118 Glycine max
Glyma.02G207800 5.0kb downstream 5.0kb downstream 11358 true Chr02: 39260119-39271476 Glycine max
Glyma.02G207800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39266477-39271476 Glycine max
Glyma.02G207800 10.0kb upstream 10.0kb upstream 16358 true Chr02: 39250119-39266476 Glycine max
Glyma.02G207800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39250119-39260118 Glycine max
Glyma.02G207800 10.0kb downstream 10.0kb downstream 16358 true Chr02: 39260119-39276476 Glycine max
Glyma.02G207800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39266477-39276476 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304744 5265 Fabidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.4247 0.0 19.1007    
cufflinks 4.16906 0.0 18.2486    
cufflinks 13.3141 0.0 49.9517   High
cufflinks 1.97764 0.0 9.92631   Low
cufflinks 5.66072 0.0 23.0822    
cufflinks 14.3694 0.0 53.7883   High
cufflinks 2.38108 0.0 12.6387   Low
cufflinks 3.56984 0.0 16.3108    
cufflinks 6.11795 0.0 24.6132    
cufflinks 0.697        
cufflinks 1.24        
cufflinks 1.299        
cufflinks 1.031        
cufflinks 0.683        
cufflinks 0.143       Low
cufflinks 0.839        
cufflinks 3.587       High
cufflinks 0.645        
cufflinks 0.521        
cufflinks 0.842        
cufflinks 0.93        
cufflinks 0.883        
cufflinks 0.794        
cufflinks 1.088        
cufflinks 0.782        
cufflinks 2.747       High

0 Strain