Gene : Glyma.02G236800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31194//PTHR31194:SF6 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  2368
Name:  ? Glyma.02G236800 Secondary Identifier:  ? PAC:30507646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G236800 0.5kb upstream 0.5kb upstream 2728 true Chr02: 42480999-42483726 Glycine max
Glyma.02G236800 0.5kb upstream 0.5kb upstream 500 false Chr02: 42483227-42483726 Glycine max
Glyma.02G236800 0.5kb downstream 0.5kb downstream 2728 true Chr02: 42480499-42483226 Glycine max
Glyma.02G236800 0.5kb downstream 0.5kb downstream 500 false Chr02: 42480499-42480998 Glycine max
Glyma.02G236800 1.0kb upstream 1.0kb upstream 3228 true Chr02: 42480999-42484226 Glycine max
Glyma.02G236800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42483227-42484226 Glycine max
Glyma.02G236800 1.0kb downstream 1.0kb downstream 3228 true Chr02: 42479999-42483226 Glycine max
Glyma.02G236800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42479999-42480998 Glycine max
Glyma.02G236800 2.0kb upstream 2.0kb upstream 4228 true Chr02: 42480999-42485226 Glycine max
Glyma.02G236800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42483227-42485226 Glycine max
Glyma.02G236800 2.0kb downstream 2.0kb downstream 4228 true Chr02: 42478999-42483226 Glycine max
Glyma.02G236800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42478999-42480998 Glycine max
Glyma.02G236800 5.0kb upstream 5.0kb upstream 7228 true Chr02: 42480999-42488226 Glycine max
Glyma.02G236800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42483227-42488226 Glycine max
Glyma.02G236800 5.0kb downstream 5.0kb downstream 7228 true Chr02: 42475999-42483226 Glycine max
Glyma.02G236800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42475999-42480998 Glycine max
Glyma.02G236800 10.0kb upstream 10.0kb upstream 12228 true Chr02: 42480999-42493226 Glycine max
Glyma.02G236800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42483227-42493226 Glycine max
Glyma.02G236800 10.0kb downstream 10.0kb downstream 12228 true Chr02: 42470999-42483226 Glycine max
Glyma.02G236800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42470999-42480998 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304234 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.05238 0.0 19.4661   High
cufflinks 2.59485 0.0 8.11431    
cufflinks 2.15009 0.0 6.96431    
cufflinks 2.4638 0.0 7.75017    
cufflinks 0.845913 0.0 2.99612   Low
cufflinks 0.608159 0.0 2.20755   Low
cufflinks 11.7254 0.0 31.4409   High
cufflinks 4.68451 0.0 13.486    
cufflinks 1.08903 0.0 3.78594    
cufflinks 7.097       High
cufflinks 0.436        
cufflinks 5.552       High
cufflinks 0.544        
cufflinks 0.205       Low
cufflinks 0.4        
cufflinks 0.849        
cufflinks 3.38       High
cufflinks 2.417        
cufflinks 1.652        
cufflinks 0.432        
cufflinks 0.162       Low
cufflinks 0.717        
cufflinks 1.314        
cufflinks 0.172       Low
cufflinks 0.401        
cufflinks 0.272        

0 Strain