Gene : Glyma.02G235800 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23092:SF30 - NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  2358
Name:  ? Glyma.02G235800 Secondary Identifier:  ? PAC:30507689
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G235800 0.5kb upstream 0.5kb upstream 9970 true Chr02: 42321668-42331637 Glycine max
Glyma.02G235800 0.5kb upstream 0.5kb upstream 500 false Chr02: 42331138-42331637 Glycine max
Glyma.02G235800 0.5kb downstream 0.5kb downstream 9970 true Chr02: 42321168-42331137 Glycine max
Glyma.02G235800 0.5kb downstream 0.5kb downstream 500 false Chr02: 42321168-42321667 Glycine max
Glyma.02G235800 1.0kb upstream 1.0kb upstream 10470 true Chr02: 42321668-42332137 Glycine max
Glyma.02G235800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42331138-42332137 Glycine max
Glyma.02G235800 1.0kb downstream 1.0kb downstream 10470 true Chr02: 42320668-42331137 Glycine max
Glyma.02G235800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42320668-42321667 Glycine max
Glyma.02G235800 2.0kb upstream 2.0kb upstream 11470 true Chr02: 42321668-42333137 Glycine max
Glyma.02G235800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42331138-42333137 Glycine max
Glyma.02G235800 2.0kb downstream 2.0kb downstream 11470 true Chr02: 42319668-42331137 Glycine max
Glyma.02G235800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42319668-42321667 Glycine max
Glyma.02G235800 5.0kb upstream 5.0kb upstream 14470 true Chr02: 42321668-42336137 Glycine max
Glyma.02G235800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42331138-42336137 Glycine max
Glyma.02G235800 5.0kb downstream 5.0kb downstream 14470 true Chr02: 42316668-42331137 Glycine max
Glyma.02G235800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42316668-42321667 Glycine max
Glyma.02G235800 10.0kb upstream 10.0kb upstream 19470 true Chr02: 42321668-42341137 Glycine max
Glyma.02G235800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42331138-42341137 Glycine max
Glyma.02G235800 10.0kb downstream 10.0kb downstream 19470 true Chr02: 42311668-42331137 Glycine max
Glyma.02G235800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42311668-42321667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309932 5265 Fabidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8225 0.0 42.7616    
cufflinks 9.27204 0.0 33.2307    
cufflinks 13.8482 0.0 50.9682   High
cufflinks 8.73691 0.0 30.7896    
cufflinks 8.39074 0.0 29.5007    
cufflinks 6.41059 0.0 23.4939   Low
cufflinks 11.5403 0.0 39.7622    
cufflinks 8.73697 0.0 31.4451    
cufflinks 9.28044 0.0 33.4241    
cufflinks 0.991       Low
cufflinks 3.116       High
cufflinks 1.83        
cufflinks 1.119       Low
cufflinks 1.362        
cufflinks 3.313       High
cufflinks 1.689        
cufflinks 1.145       Low
cufflinks 1.91        
cufflinks 1.974        
cufflinks 1.804        
cufflinks 2.781       High
cufflinks 1.854        
cufflinks 1.587        
cufflinks 2.547        
cufflinks 1.775        
cufflinks 1.733        

0 Strain