Gene : Glyma.02G221500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12534 - 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR Genomic Order:  2215
Name:  ? Glyma.02G221500 Secondary Identifier:  ? PAC:30507927
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G221500 0.5kb upstream 0.5kb upstream 1049 true Chr02: 40920708-40921756 Glycine max
Glyma.02G221500 0.5kb upstream 0.5kb upstream 500 false Chr02: 40920708-40921207 Glycine max
Glyma.02G221500 0.5kb downstream 0.5kb downstream 1049 true Chr02: 40921208-40922256 Glycine max
Glyma.02G221500 0.5kb downstream 0.5kb downstream 500 false Chr02: 40921757-40922256 Glycine max
Glyma.02G221500 1.0kb upstream 1.0kb upstream 1549 true Chr02: 40920208-40921756 Glycine max
Glyma.02G221500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40920208-40921207 Glycine max
Glyma.02G221500 1.0kb downstream 1.0kb downstream 1549 true Chr02: 40921208-40922756 Glycine max
Glyma.02G221500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40921757-40922756 Glycine max
Glyma.02G221500 2.0kb upstream 2.0kb upstream 2549 true Chr02: 40919208-40921756 Glycine max
Glyma.02G221500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40919208-40921207 Glycine max
Glyma.02G221500 2.0kb downstream 2.0kb downstream 2549 true Chr02: 40921208-40923756 Glycine max
Glyma.02G221500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40921757-40923756 Glycine max
Glyma.02G221500 5.0kb upstream 5.0kb upstream 5549 true Chr02: 40916208-40921756 Glycine max
Glyma.02G221500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40916208-40921207 Glycine max
Glyma.02G221500 5.0kb downstream 5.0kb downstream 5549 true Chr02: 40921208-40926756 Glycine max
Glyma.02G221500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40921757-40926756 Glycine max
Glyma.02G221500 10.0kb upstream 10.0kb upstream 10549 true Chr02: 40911208-40921756 Glycine max
Glyma.02G221500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40911208-40921207 Glycine max
Glyma.02G221500 10.0kb downstream 10.0kb downstream 10549 true Chr02: 40921208-40931756 Glycine max
Glyma.02G221500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40921757-40931756 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241815 5265 Fabidae Singleton cluster - no MSA
124051316 5270 Rosid View MSA
123753545 5271 Pentapetalae View MSA
122797827 5272 Eudicot View MSA
122050260 5273 Angiosperm View MSA
121348361 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.397       High
cufflinks 0.032     Low Low
cufflinks 0.055     Low  
cufflinks 0.057     Low  
cufflinks 0.044     Low Low
cufflinks 0.032     Low Low
cufflinks 0.192        
cufflinks 0.118        
cufflinks 0.059     Low  
cufflinks 0.238        
cufflinks 0.258        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284        
cufflinks 0.54       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.269        
cufflinks 0.114        

0 Strain