Gene : Glyma.02G223100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23315:SF88 - ARM REPEAT PROTEIN Genomic Order:  2231
Name:  ? Glyma.02G223100 Secondary Identifier:  ? PAC:30506646
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G223100 0.5kb upstream 0.5kb upstream 5821 true Chr02: 41088510-41094330 Glycine max
Glyma.02G223100 0.5kb upstream 0.5kb upstream 500 false Chr02: 41088510-41089009 Glycine max
Glyma.02G223100 0.5kb downstream 0.5kb downstream 5821 true Chr02: 41089010-41094830 Glycine max
Glyma.02G223100 0.5kb downstream 0.5kb downstream 500 false Chr02: 41094331-41094830 Glycine max
Glyma.02G223100 1.0kb upstream 1.0kb upstream 6321 true Chr02: 41088010-41094330 Glycine max
Glyma.02G223100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41088010-41089009 Glycine max
Glyma.02G223100 1.0kb downstream 1.0kb downstream 6321 true Chr02: 41089010-41095330 Glycine max
Glyma.02G223100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41094331-41095330 Glycine max
Glyma.02G223100 2.0kb upstream 2.0kb upstream 7321 true Chr02: 41087010-41094330 Glycine max
Glyma.02G223100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41087010-41089009 Glycine max
Glyma.02G223100 2.0kb downstream 2.0kb downstream 7321 true Chr02: 41089010-41096330 Glycine max
Glyma.02G223100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41094331-41096330 Glycine max
Glyma.02G223100 5.0kb upstream 5.0kb upstream 10321 true Chr02: 41084010-41094330 Glycine max
Glyma.02G223100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41084010-41089009 Glycine max
Glyma.02G223100 5.0kb downstream 5.0kb downstream 10321 true Chr02: 41089010-41099330 Glycine max
Glyma.02G223100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41094331-41099330 Glycine max
Glyma.02G223100 10.0kb upstream 10.0kb upstream 15321 true Chr02: 41079010-41094330 Glycine max
Glyma.02G223100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41079010-41089009 Glycine max
Glyma.02G223100 10.0kb downstream 10.0kb downstream 15321 true Chr02: 41089010-41104330 Glycine max
Glyma.02G223100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41094331-41104330 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241986 5265 Fabidae Singleton cluster - no MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06395 0.0 17.9792   Low
cufflinks 10.3718 0.0 31.9401   High
cufflinks 5.57162 0.0 19.5643    
cufflinks 6.73946 0.0 22.6654    
cufflinks 5.43061 0.0 18.8912    
cufflinks 6.07901 0.0 20.7834    
cufflinks 8.22299 0.0 26.408    
cufflinks 7.28567 0.0 24.0751    
cufflinks 7.04975 0.0 23.3057    
cufflinks 1.569        
cufflinks 0.71        
cufflinks 1.9        
cufflinks 1.335        
cufflinks 1.254        
cufflinks 1.32        
cufflinks 2.269        
cufflinks 0.255       Low
cufflinks 1.882        
cufflinks 2.829       High
cufflinks 2.431        
cufflinks 0.913        
cufflinks 2.44        
cufflinks 3.737       High
cufflinks 0.823        
cufflinks 1.866        
cufflinks 0.442       Low

0 Strain