Gene : Glyma.02G217800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  2178
Name:  ? Glyma.02G217800 Secondary Identifier:  ? PAC:30510595
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G217800 0.5kb upstream 0.5kb upstream 2798 true Chr02: 40487469-40490266 Glycine max
Glyma.02G217800 0.5kb upstream 0.5kb upstream 500 false Chr02: 40487469-40487968 Glycine max
Glyma.02G217800 0.5kb downstream 0.5kb downstream 2798 true Chr02: 40487969-40490766 Glycine max
Glyma.02G217800 0.5kb downstream 0.5kb downstream 500 false Chr02: 40490267-40490766 Glycine max
Glyma.02G217800 1.0kb upstream 1.0kb upstream 3298 true Chr02: 40486969-40490266 Glycine max
Glyma.02G217800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40486969-40487968 Glycine max
Glyma.02G217800 1.0kb downstream 1.0kb downstream 3298 true Chr02: 40487969-40491266 Glycine max
Glyma.02G217800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40490267-40491266 Glycine max
Glyma.02G217800 2.0kb upstream 2.0kb upstream 4298 true Chr02: 40485969-40490266 Glycine max
Glyma.02G217800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40485969-40487968 Glycine max
Glyma.02G217800 2.0kb downstream 2.0kb downstream 4298 true Chr02: 40487969-40492266 Glycine max
Glyma.02G217800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40490267-40492266 Glycine max
Glyma.02G217800 5.0kb upstream 5.0kb upstream 7298 true Chr02: 40482969-40490266 Glycine max
Glyma.02G217800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40482969-40487968 Glycine max
Glyma.02G217800 5.0kb downstream 5.0kb downstream 7298 true Chr02: 40487969-40495266 Glycine max
Glyma.02G217800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40490267-40495266 Glycine max
Glyma.02G217800 10.0kb upstream 10.0kb upstream 12298 true Chr02: 40477969-40490266 Glycine max
Glyma.02G217800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40477969-40487968 Glycine max
Glyma.02G217800 10.0kb downstream 10.0kb downstream 12298 true Chr02: 40487969-40500266 Glycine max
Glyma.02G217800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40490267-40500266 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.8661 0.0 158.907 High High
cufflinks 3.37519 0.0 10.6391    
cufflinks 0.277078 0.0 1.06049   Low
cufflinks 1.0392 0.0 3.7176    
cufflinks 5.64046 0.0 16.5784    
cufflinks 3.31077 0.0 10.4791    
cufflinks 1.95239 0.0 6.62793    
cufflinks 5.83368 0.0 16.983    
cufflinks 26.8279 0.0 71.6949 High High
cufflinks 2.56        
cufflinks 17.074     High  
cufflinks 0.823        
cufflinks 7.999     High  
cufflinks 6.508        
cufflinks 36.747     High High
cufflinks 1.086        
cufflinks 80.436     High High
cufflinks 0.439       Low
cufflinks 2.462        
cufflinks 0.148       Low
cufflinks 61.362     High High
cufflinks 0.399       Low
cufflinks 0.435       Low
cufflinks 46.467     High High
cufflinks 0.372       Low
cufflinks 72.378     High High

0 Strain