Gene : Glyma.02G011800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  118
Name:  ? Glyma.02G011800 Secondary Identifier:  ? PAC:30511084
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G011800 0.5kb upstream 0.5kb upstream 4811 true Chr02: 1081556-1086366 Glycine max
Glyma.02G011800 0.5kb upstream 0.5kb upstream 500 false Chr02: 1081556-1082055 Glycine max
Glyma.02G011800 0.5kb downstream 0.5kb downstream 4811 true Chr02: 1082056-1086866 Glycine max
Glyma.02G011800 0.5kb downstream 0.5kb downstream 500 false Chr02: 1086367-1086866 Glycine max
Glyma.02G011800 1.0kb upstream 1.0kb upstream 5311 true Chr02: 1081056-1086366 Glycine max
Glyma.02G011800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1081056-1082055 Glycine max
Glyma.02G011800 1.0kb downstream 1.0kb downstream 5311 true Chr02: 1082056-1087366 Glycine max
Glyma.02G011800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1086367-1087366 Glycine max
Glyma.02G011800 2.0kb upstream 2.0kb upstream 6311 true Chr02: 1080056-1086366 Glycine max
Glyma.02G011800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1080056-1082055 Glycine max
Glyma.02G011800 2.0kb downstream 2.0kb downstream 6311 true Chr02: 1082056-1088366 Glycine max
Glyma.02G011800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1086367-1088366 Glycine max
Glyma.02G011800 5.0kb upstream 5.0kb upstream 9311 true Chr02: 1077056-1086366 Glycine max
Glyma.02G011800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1077056-1082055 Glycine max
Glyma.02G011800 5.0kb downstream 5.0kb downstream 9311 true Chr02: 1082056-1091366 Glycine max
Glyma.02G011800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1086367-1091366 Glycine max
Glyma.02G011800 10.0kb upstream 10.0kb upstream 14311 true Chr02: 1072056-1086366 Glycine max
Glyma.02G011800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1072056-1082055 Glycine max
Glyma.02G011800 10.0kb downstream 10.0kb downstream 14311 true Chr02: 1082056-1096366 Glycine max
Glyma.02G011800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1086367-1096366 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308927 5265 Fabidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.4769 0.0 213.641 High High
cufflinks 32.1995 0.0 109.851 High  
cufflinks 34.4269 0.0 118.008 High  
cufflinks 27.0799 0.0 92.0598 High  
cufflinks 21.8066 0.0 74.5442 High  
cufflinks 15.7616 0.0 55.4361   Low
cufflinks 32.6811 0.0 111.486 High  
cufflinks 21.5815 0.0 73.7419 High  
cufflinks 16.4576 0.0 57.5266   Low
cufflinks 2.853        
cufflinks 0.213       Low
cufflinks 5.165        
cufflinks 3.025        
cufflinks 3.083        
cufflinks 0.887        
cufflinks 7.492     High High
cufflinks 1.271        
cufflinks 3.975        
cufflinks 4.093        
cufflinks 6.746        
cufflinks 0.443       Low
cufflinks 6.447        
cufflinks 7.16        
cufflinks 0.396       Low
cufflinks 6.814        
cufflinks 0.795        

0 Strain