Gene : Glyma.02G013300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  133
Name:  ? Glyma.02G013300 Secondary Identifier:  ? PAC:30508038
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G013300 0.5kb upstream 0.5kb upstream 5174 true Chr02: 1195704-1200877 Glycine max
Glyma.02G013300 0.5kb upstream 0.5kb upstream 500 false Chr02: 1195704-1196203 Glycine max
Glyma.02G013300 0.5kb downstream 0.5kb downstream 5174 true Chr02: 1196204-1201377 Glycine max
Glyma.02G013300 0.5kb downstream 0.5kb downstream 500 false Chr02: 1200878-1201377 Glycine max
Glyma.02G013300 1.0kb upstream 1.0kb upstream 5674 true Chr02: 1195204-1200877 Glycine max
Glyma.02G013300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1195204-1196203 Glycine max
Glyma.02G013300 1.0kb downstream 1.0kb downstream 5674 true Chr02: 1196204-1201877 Glycine max
Glyma.02G013300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1200878-1201877 Glycine max
Glyma.02G013300 2.0kb upstream 2.0kb upstream 6674 true Chr02: 1194204-1200877 Glycine max
Glyma.02G013300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1194204-1196203 Glycine max
Glyma.02G013300 2.0kb downstream 2.0kb downstream 6674 true Chr02: 1196204-1202877 Glycine max
Glyma.02G013300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1200878-1202877 Glycine max
Glyma.02G013300 5.0kb upstream 5.0kb upstream 9674 true Chr02: 1191204-1200877 Glycine max
Glyma.02G013300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1191204-1196203 Glycine max
Glyma.02G013300 5.0kb downstream 5.0kb downstream 9674 true Chr02: 1196204-1205877 Glycine max
Glyma.02G013300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1200878-1205877 Glycine max
Glyma.02G013300 10.0kb upstream 10.0kb upstream 14674 true Chr02: 1186204-1200877 Glycine max
Glyma.02G013300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1186204-1196203 Glycine max
Glyma.02G013300 10.0kb downstream 10.0kb downstream 14674 true Chr02: 1196204-1210877 Glycine max
Glyma.02G013300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1200878-1210877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296472 5265 Fabidae View MSA
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188403 0.0 0.711263 Low Low
cufflinks 0.847619 0.0 2.90989    
cufflinks 0.583671 0.0 2.06893    
cufflinks 0.985712 0.0 3.32089    
cufflinks 4.93149 0.0 13.5382    
cufflinks 0.70949 0.0 2.46909    
cufflinks 0.205802 0.0 0.773285 Low Low
cufflinks 24.1192 0.0 66.6661 High High
cufflinks 4.17475 0.0 11.6356    
cufflinks 5.793       High
cufflinks 0.241       Low
cufflinks 0.52        
cufflinks 3.525       High
cufflinks 4.735       High
cufflinks 0.165       Low
cufflinks 1.776        
cufflinks 2.559        
cufflinks 0.792        
cufflinks 0.816        
cufflinks 1.19        
cufflinks 0.668        
cufflinks 1.58        
cufflinks 1.334        
cufflinks 0.381       Low
cufflinks 1.406        
cufflinks 1.094        

0 Strain