Gene : Glyma.02G000600 G. max Wm82.a2.v1
Defline:  (1 of 24) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  6
Name:  ? Glyma.02G000600 Secondary Identifier:  ? PAC:30510429
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G000600 0.5kb upstream 0.5kb upstream 6081 true Chr02: 65663-71743 Glycine max
Glyma.02G000600 0.5kb upstream 0.5kb upstream 500 false Chr02: 65663-66162 Glycine max
Glyma.02G000600 0.5kb downstream 0.5kb downstream 6081 true Chr02: 66163-72243 Glycine max
Glyma.02G000600 0.5kb downstream 0.5kb downstream 500 false Chr02: 71744-72243 Glycine max
Glyma.02G000600 1.0kb upstream 1.0kb upstream 6581 true Chr02: 65163-71743 Glycine max
Glyma.02G000600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 65163-66162 Glycine max
Glyma.02G000600 1.0kb downstream 1.0kb downstream 6581 true Chr02: 66163-72743 Glycine max
Glyma.02G000600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 71744-72743 Glycine max
Glyma.02G000600 2.0kb upstream 2.0kb upstream 7581 true Chr02: 64163-71743 Glycine max
Glyma.02G000600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 64163-66162 Glycine max
Glyma.02G000600 2.0kb downstream 2.0kb downstream 7581 true Chr02: 66163-73743 Glycine max
Glyma.02G000600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 71744-73743 Glycine max
Glyma.02G000600 5.0kb upstream 5.0kb upstream 10581 true Chr02: 61163-71743 Glycine max
Glyma.02G000600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61163-66162 Glycine max
Glyma.02G000600 5.0kb downstream 5.0kb downstream 10581 true Chr02: 66163-76743 Glycine max
Glyma.02G000600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 71744-76743 Glycine max
Glyma.02G000600 10.0kb upstream 10.0kb upstream 15581 true Chr02: 56163-71743 Glycine max
Glyma.02G000600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56163-66162 Glycine max
Glyma.02G000600 10.0kb downstream 10.0kb downstream 15581 true Chr02: 66163-81743 Glycine max
Glyma.02G000600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 71744-81743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311646 5265 Fabidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5499 0.0 41.6169    
cufflinks 20.9071 0.0 56.6705 High  
cufflinks 12.4467 0.0 33.2133   Low
cufflinks 16.8083 0.0 45.1151    
cufflinks 23.7724 0.0 64.9348 High High
cufflinks 15.677 0.0 41.9666    
cufflinks 24.2255 0.0 66.215 High High
cufflinks 15.8794 0.0 42.5441    
cufflinks 17.4048 0.0 46.7682    
cufflinks 7.066        
cufflinks 0.828       Low
cufflinks 8.573     High  
cufflinks 17.136     High High
cufflinks 24.025     High High
cufflinks 1.676       Low
cufflinks 5.109        
cufflinks 3.341        
cufflinks 8.828     High  
cufflinks 11.743     High High
cufflinks 3.28        
cufflinks 1.704       Low
cufflinks 4.191        
cufflinks 7.098        
cufflinks 1.296       Low
cufflinks 4.086        
cufflinks 2.581        

0 Strain