Gene : Glyma.02G007300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31734:SF15 - AUXIN-RESPONSIVE PROTEIN IAA20-RELATED Genomic Order:  73
Name:  ? Glyma.02G007300 Secondary Identifier:  ? PAC:30506314
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G007300 0.5kb upstream 0.5kb upstream 2094 true Chr02: 761328-763421 Glycine max
Glyma.02G007300 0.5kb upstream 0.5kb upstream 500 false Chr02: 761328-761827 Glycine max
Glyma.02G007300 0.5kb downstream 0.5kb downstream 2094 true Chr02: 761828-763921 Glycine max
Glyma.02G007300 0.5kb downstream 0.5kb downstream 500 false Chr02: 763422-763921 Glycine max
Glyma.02G007300 1.0kb upstream 1.0kb upstream 2594 true Chr02: 760828-763421 Glycine max
Glyma.02G007300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 760828-761827 Glycine max
Glyma.02G007300 1.0kb downstream 1.0kb downstream 2594 true Chr02: 761828-764421 Glycine max
Glyma.02G007300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 763422-764421 Glycine max
Glyma.02G007300 2.0kb upstream 2.0kb upstream 3594 true Chr02: 759828-763421 Glycine max
Glyma.02G007300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 759828-761827 Glycine max
Glyma.02G007300 2.0kb downstream 2.0kb downstream 3594 true Chr02: 761828-765421 Glycine max
Glyma.02G007300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 763422-765421 Glycine max
Glyma.02G007300 5.0kb upstream 5.0kb upstream 6594 true Chr02: 756828-763421 Glycine max
Glyma.02G007300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 756828-761827 Glycine max
Glyma.02G007300 5.0kb downstream 5.0kb downstream 6594 true Chr02: 761828-768421 Glycine max
Glyma.02G007300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 763422-768421 Glycine max
Glyma.02G007300 10.0kb upstream 10.0kb upstream 11594 true Chr02: 751828-763421 Glycine max
Glyma.02G007300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 751828-761827 Glycine max
Glyma.02G007300 10.0kb downstream 10.0kb downstream 11594 true Chr02: 761828-773421 Glycine max
Glyma.02G007300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 763422-773421 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297026 5265 Fabidae View MSA
124071177 5270 Rosid View MSA
123752177 5271 Pentapetalae View MSA
122794866 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312466 0.0 1.21212   High
cufflinks 0.25845 0.0 1.00996    
cufflinks 0.173964 0.0 0.688435 Low  
cufflinks 0.106747 0.0 0.430858 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.124496 0.0 0.499783 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.258089 0.0 1.00772    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.341       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.463       High
cufflinks 0.09     Low  
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121        
cufflinks 0.471       High
cufflinks 0.203        
cufflinks 0.087     Low  
cufflinks 0.079     Low  
cufflinks 0.121        
cufflinks 0.071     Low  
cufflinks 0.244        
cufflinks 0.013     Low Low
cufflinks 0.057     Low  
cufflinks 0.182        

0 Strain