Gene : Glyma.02G004200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  42
Name:  ? Glyma.02G004200 Secondary Identifier:  ? PAC:30508035
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G004200 0.5kb upstream 0.5kb upstream 9647 true Chr02: 471959-481605 Glycine max
Glyma.02G004200 0.5kb upstream 0.5kb upstream 500 false Chr02: 481106-481605 Glycine max
Glyma.02G004200 0.5kb downstream 0.5kb downstream 9647 true Chr02: 471459-481105 Glycine max
Glyma.02G004200 0.5kb downstream 0.5kb downstream 500 false Chr02: 471459-471958 Glycine max
Glyma.02G004200 1.0kb upstream 1.0kb upstream 10147 true Chr02: 471959-482105 Glycine max
Glyma.02G004200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 481106-482105 Glycine max
Glyma.02G004200 1.0kb downstream 1.0kb downstream 10147 true Chr02: 470959-481105 Glycine max
Glyma.02G004200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 470959-471958 Glycine max
Glyma.02G004200 2.0kb upstream 2.0kb upstream 11147 true Chr02: 471959-483105 Glycine max
Glyma.02G004200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 481106-483105 Glycine max
Glyma.02G004200 2.0kb downstream 2.0kb downstream 11147 true Chr02: 469959-481105 Glycine max
Glyma.02G004200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 469959-471958 Glycine max
Glyma.02G004200 5.0kb upstream 5.0kb upstream 14147 true Chr02: 471959-486105 Glycine max
Glyma.02G004200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 481106-486105 Glycine max
Glyma.02G004200 5.0kb downstream 5.0kb downstream 14147 true Chr02: 466959-481105 Glycine max
Glyma.02G004200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 466959-471958 Glycine max
Glyma.02G004200 10.0kb upstream 10.0kb upstream 19147 true Chr02: 471959-491105 Glycine max
Glyma.02G004200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 481106-491105 Glycine max
Glyma.02G004200 10.0kb downstream 10.0kb downstream 19147 true Chr02: 461959-481105 Glycine max
Glyma.02G004200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 461959-471958 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254649 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96539 0.0 13.9899    
cufflinks 4.62977 0.0 13.9856   High
cufflinks 1.37103 0.0 5.22688   Low
cufflinks 3.59084 0.0 11.0678    
cufflinks 2.45995 0.0 8.13058    
cufflinks 1.89683 0.0 6.64189   Low
cufflinks 2.95069 0.0 9.45231    
cufflinks 3.9383 0.0 13.8038    
cufflinks 3.65154 0.0 12.9419    
cufflinks 0.95        
cufflinks 0.107       Low
cufflinks 0.964        
cufflinks 0.79        
cufflinks 0.91        
cufflinks 0.18       Low
cufflinks 0.804        
cufflinks 0.323        
cufflinks 1.251        
cufflinks 1.584       High
cufflinks 0.879        
cufflinks 0.159       Low
cufflinks 1.001        
cufflinks 0.992        
cufflinks 0.216       Low
cufflinks 0.791        
cufflinks 0.253        

0 Strain