Gene : Glyma.18G283300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  2833
Name:  ? Glyma.18G283300 Secondary Identifier:  ? PAC:30557017
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G283300 0.5kb upstream 0.5kb upstream 5623 true Chr18: 56411520-56417142 Glycine max
Glyma.18G283300 0.5kb upstream 0.5kb upstream 500 false Chr18: 56416643-56417142 Glycine max
Glyma.18G283300 0.5kb downstream 0.5kb downstream 5623 true Chr18: 56411020-56416642 Glycine max
Glyma.18G283300 0.5kb downstream 0.5kb downstream 500 false Chr18: 56411020-56411519 Glycine max
Glyma.18G283300 1.0kb upstream 1.0kb upstream 6123 true Chr18: 56411520-56417642 Glycine max
Glyma.18G283300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56416643-56417642 Glycine max
Glyma.18G283300 1.0kb downstream 1.0kb downstream 6123 true Chr18: 56410520-56416642 Glycine max
Glyma.18G283300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56410520-56411519 Glycine max
Glyma.18G283300 2.0kb upstream 2.0kb upstream 7123 true Chr18: 56411520-56418642 Glycine max
Glyma.18G283300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56416643-56418642 Glycine max
Glyma.18G283300 2.0kb downstream 2.0kb downstream 7123 true Chr18: 56409520-56416642 Glycine max
Glyma.18G283300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56409520-56411519 Glycine max
Glyma.18G283300 5.0kb upstream 5.0kb upstream 10123 true Chr18: 56411520-56421642 Glycine max
Glyma.18G283300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56416643-56421642 Glycine max
Glyma.18G283300 5.0kb downstream 5.0kb downstream 10123 true Chr18: 56406520-56416642 Glycine max
Glyma.18G283300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56406520-56411519 Glycine max
Glyma.18G283300 10.0kb upstream 10.0kb upstream 15123 true Chr18: 56411520-56426642 Glycine max
Glyma.18G283300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56416643-56426642 Glycine max
Glyma.18G283300 10.0kb downstream 10.0kb downstream 15123 true Chr18: 56401520-56416642 Glycine max
Glyma.18G283300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56401520-56411519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300988 5265 Fabidae View MSA
124051240 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49485 0.0 15.2916    
cufflinks 6.63436 0.0 18.1887    
cufflinks 8.65419 0.0 23.329    
cufflinks 8.70022 0.0 23.4516    
cufflinks 6.30871 0.0 17.3475    
cufflinks 10.7095 0.0 28.6527   High
cufflinks 3.11008 0.0 9.26482   Low
cufflinks 8.94023 0.0 24.0812    
cufflinks 5.24655 0.0 14.6645    
cufflinks 4.794        
cufflinks 8.302     High High
cufflinks 4.556        
cufflinks 3.744        
cufflinks 3.255        
cufflinks 6.359     High  
cufflinks 3.83        
cufflinks 8.843     High High
cufflinks 3.864        
cufflinks 4.615        
cufflinks 3.164       Low
cufflinks 6.967     High  
cufflinks 3.298        
cufflinks 3.04       Low
cufflinks 7.541     High  
cufflinks 3.64        
cufflinks 14.457     High High

0 Strain