Gene : Glyma.02G016200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  162
Name:  ? Glyma.02G016200 Secondary Identifier:  ? PAC:30506361
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G016200 0.5kb upstream 0.5kb upstream 1767 true Chr02: 1448900-1450666 Glycine max
Glyma.02G016200 0.5kb upstream 0.5kb upstream 500 false Chr02: 1448900-1449399 Glycine max
Glyma.02G016200 0.5kb downstream 0.5kb downstream 1767 true Chr02: 1449400-1451166 Glycine max
Glyma.02G016200 0.5kb downstream 0.5kb downstream 500 false Chr02: 1450667-1451166 Glycine max
Glyma.02G016200 1.0kb upstream 1.0kb upstream 2267 true Chr02: 1448400-1450666 Glycine max
Glyma.02G016200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1448400-1449399 Glycine max
Glyma.02G016200 1.0kb downstream 1.0kb downstream 2267 true Chr02: 1449400-1451666 Glycine max
Glyma.02G016200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1450667-1451666 Glycine max
Glyma.02G016200 2.0kb upstream 2.0kb upstream 3267 true Chr02: 1447400-1450666 Glycine max
Glyma.02G016200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1447400-1449399 Glycine max
Glyma.02G016200 2.0kb downstream 2.0kb downstream 3267 true Chr02: 1449400-1452666 Glycine max
Glyma.02G016200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1450667-1452666 Glycine max
Glyma.02G016200 5.0kb upstream 5.0kb upstream 6267 true Chr02: 1444400-1450666 Glycine max
Glyma.02G016200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1444400-1449399 Glycine max
Glyma.02G016200 5.0kb downstream 5.0kb downstream 6267 true Chr02: 1449400-1455666 Glycine max
Glyma.02G016200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1450667-1455666 Glycine max
Glyma.02G016200 10.0kb upstream 10.0kb upstream 11267 true Chr02: 1439400-1450666 Glycine max
Glyma.02G016200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1439400-1449399 Glycine max
Glyma.02G016200 10.0kb downstream 10.0kb downstream 11267 true Chr02: 1449400-1460666 Glycine max
Glyma.02G016200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1450667-1460666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309841 5265 Fabidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0272189 0.0 0.123438 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0608338 0.0 0.257556 Low  
cufflinks 28.0991 0.0 75.5502 High  
cufflinks 2059.88 0.0 13080.7 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.137021 0.0 0.55275 Low  
cufflinks 20.2658 0.0 55.3918 High  
cufflinks 0.505        
cufflinks 1.086        
cufflinks 0.052     Low Low
cufflinks 67.041     High High
cufflinks 12.868     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104        
cufflinks 0.685        
cufflinks 0.473        
cufflinks 0.106        
cufflinks 0.045     Low Low
cufflinks 0.758        
cufflinks 0.115        
cufflinks 0.122        
cufflinks 0.552        
cufflinks 0.105        
cufflinks 4.31       High

0 Strain