Gene : Glyma.18G283800 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  2838
Name:  ? Glyma.18G283800 Secondary Identifier:  ? PAC:30555528
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G283800 0.5kb upstream 0.5kb upstream 7448 true Chr18: 56444516-56451963 Glycine max
Glyma.18G283800 0.5kb upstream 0.5kb upstream 500 false Chr18: 56444516-56445015 Glycine max
Glyma.18G283800 0.5kb downstream 0.5kb downstream 7448 true Chr18: 56445016-56452463 Glycine max
Glyma.18G283800 0.5kb downstream 0.5kb downstream 500 false Chr18: 56451964-56452463 Glycine max
Glyma.18G283800 1.0kb upstream 1.0kb upstream 7948 true Chr18: 56444016-56451963 Glycine max
Glyma.18G283800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56444016-56445015 Glycine max
Glyma.18G283800 1.0kb downstream 1.0kb downstream 7948 true Chr18: 56445016-56452963 Glycine max
Glyma.18G283800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56451964-56452963 Glycine max
Glyma.18G283800 2.0kb upstream 2.0kb upstream 8948 true Chr18: 56443016-56451963 Glycine max
Glyma.18G283800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56443016-56445015 Glycine max
Glyma.18G283800 2.0kb downstream 2.0kb downstream 8948 true Chr18: 56445016-56453963 Glycine max
Glyma.18G283800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56451964-56453963 Glycine max
Glyma.18G283800 5.0kb upstream 5.0kb upstream 11948 true Chr18: 56440016-56451963 Glycine max
Glyma.18G283800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56440016-56445015 Glycine max
Glyma.18G283800 5.0kb downstream 5.0kb downstream 11948 true Chr18: 56445016-56456963 Glycine max
Glyma.18G283800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56451964-56456963 Glycine max
Glyma.18G283800 10.0kb upstream 10.0kb upstream 16948 true Chr18: 56435016-56451963 Glycine max
Glyma.18G283800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56435016-56445015 Glycine max
Glyma.18G283800 10.0kb downstream 10.0kb downstream 16948 true Chr18: 56445016-56461963 Glycine max
Glyma.18G283800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56451964-56461963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306158 5265 Fabidae View MSA
124067614 5270 Rosid View MSA
123741610 5271 Pentapetalae View MSA
122785938 5272 Eudicot View MSA
122042412 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9661 0.0 71.5562   High
cufflinks 11.6449 0.0 41.4767   Low
cufflinks 11.8715 0.0 36.5331   Low
cufflinks 13.6997 0.0 47.812    
cufflinks 15.7886 0.0 47.5208    
cufflinks 16.6314 0.0 57.2445    
cufflinks 17.8581 0.0 61.2652    
cufflinks 14.0312 0.0 42.5658    
cufflinks 19.2287 0.0 60.8669   High
cufflinks 0.999        
cufflinks 0.726       Low
cufflinks 1.345        
cufflinks 1.717       High
cufflinks 1.997       High
cufflinks 1.31        
cufflinks 1.078        
cufflinks 1.021        
cufflinks 1.298        
cufflinks 1.072        
cufflinks 1.173        
cufflinks 1.125        
cufflinks 1.228        
cufflinks 1.215        
cufflinks 1.0        
cufflinks 1.109        
cufflinks 1.191        

0 Strain