Gene : Glyma.02G024100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36007:SF1 - TRANSPORT PROTEIN-RELATED Genomic Order:  241
Name:  ? Glyma.02G024100 Secondary Identifier:  ? PAC:30510905
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G024100 0.5kb upstream 0.5kb upstream 4289 true Chr02: 2146116-2150404 Glycine max
Glyma.02G024100 0.5kb upstream 0.5kb upstream 500 false Chr02: 2149905-2150404 Glycine max
Glyma.02G024100 0.5kb downstream 0.5kb downstream 4289 true Chr02: 2145616-2149904 Glycine max
Glyma.02G024100 0.5kb downstream 0.5kb downstream 500 false Chr02: 2145616-2146115 Glycine max
Glyma.02G024100 1.0kb upstream 1.0kb upstream 4789 true Chr02: 2146116-2150904 Glycine max
Glyma.02G024100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2149905-2150904 Glycine max
Glyma.02G024100 1.0kb downstream 1.0kb downstream 4789 true Chr02: 2145116-2149904 Glycine max
Glyma.02G024100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2145116-2146115 Glycine max
Glyma.02G024100 2.0kb upstream 2.0kb upstream 5789 true Chr02: 2146116-2151904 Glycine max
Glyma.02G024100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2149905-2151904 Glycine max
Glyma.02G024100 2.0kb downstream 2.0kb downstream 5789 true Chr02: 2144116-2149904 Glycine max
Glyma.02G024100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2144116-2146115 Glycine max
Glyma.02G024100 5.0kb upstream 5.0kb upstream 8789 true Chr02: 2146116-2154904 Glycine max
Glyma.02G024100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2149905-2154904 Glycine max
Glyma.02G024100 5.0kb downstream 5.0kb downstream 8789 true Chr02: 2141116-2149904 Glycine max
Glyma.02G024100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2141116-2146115 Glycine max
Glyma.02G024100 10.0kb upstream 10.0kb upstream 13789 true Chr02: 2146116-2159904 Glycine max
Glyma.02G024100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2149905-2159904 Glycine max
Glyma.02G024100 10.0kb downstream 10.0kb downstream 13789 true Chr02: 2136116-2149904 Glycine max
Glyma.02G024100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2136116-2146115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121609277 5273 Angiosperm Singleton cluster - no MSA
122241450 5265 Fabidae Singleton cluster - no MSA
123986313 5270 Rosid Singleton cluster - no MSA
123561675 5271 Pentapetalae Singleton cluster - no MSA
122596463 5272 Eudicot Singleton cluster - no MSA
120881534 5274 Embryophyte Singleton cluster - no MSA
122922385 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0521175 0.0 0.21827 Low Low
cufflinks 0.915174 0.0 5.78453   High
cufflinks 0.115089 0.0 0.915919 Low Low
cufflinks 0.349612 0.0 2.55243    
cufflinks 0.360923 0.0 2.56348    
cufflinks 0.257057 0.0 0.998033 Low  
cufflinks 0.72652 0.0 4.88698    
cufflinks 0.330608 0.0 1.62657    
cufflinks 0.801434 0.0 3.67982    
cufflinks 0.059     Low  
cufflinks 0.002     Low Low
cufflinks 0.078     Low  
cufflinks 0.099        
cufflinks 0.146        
cufflinks 0.042     Low  
cufflinks 0.389        
cufflinks 0.012     Low  
cufflinks 0.239        
cufflinks 0.253        
cufflinks 0.415        
cufflinks 0.003     Low Low
cufflinks 0.343        
cufflinks 0.559       High
cufflinks 0.002     Low Low
cufflinks 0.423        
cufflinks 0.01     Low  

0 Strain