Gene : Glyma.02G022000 G. max Wm82.a2.v1
Defline:  (1 of 17) PF13426 - PAS domain (PAS_9) Genomic Order:  220
Name:  ? Glyma.02G022000 Secondary Identifier:  ? PAC:30507757
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G022000 0.5kb upstream 0.5kb upstream 4605 true Chr02: 1955299-1959903 Glycine max
Glyma.02G022000 0.5kb upstream 0.5kb upstream 500 false Chr02: 1955299-1955798 Glycine max
Glyma.02G022000 0.5kb downstream 0.5kb downstream 4605 true Chr02: 1955799-1960403 Glycine max
Glyma.02G022000 0.5kb downstream 0.5kb downstream 500 false Chr02: 1959904-1960403 Glycine max
Glyma.02G022000 1.0kb upstream 1.0kb upstream 5105 true Chr02: 1954799-1959903 Glycine max
Glyma.02G022000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1954799-1955798 Glycine max
Glyma.02G022000 1.0kb downstream 1.0kb downstream 5105 true Chr02: 1955799-1960903 Glycine max
Glyma.02G022000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1959904-1960903 Glycine max
Glyma.02G022000 2.0kb upstream 2.0kb upstream 6105 true Chr02: 1953799-1959903 Glycine max
Glyma.02G022000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1953799-1955798 Glycine max
Glyma.02G022000 2.0kb downstream 2.0kb downstream 6105 true Chr02: 1955799-1961903 Glycine max
Glyma.02G022000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1959904-1961903 Glycine max
Glyma.02G022000 5.0kb upstream 5.0kb upstream 9105 true Chr02: 1950799-1959903 Glycine max
Glyma.02G022000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1950799-1955798 Glycine max
Glyma.02G022000 5.0kb downstream 5.0kb downstream 9105 true Chr02: 1955799-1964903 Glycine max
Glyma.02G022000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1959904-1964903 Glycine max
Glyma.02G022000 10.0kb upstream 10.0kb upstream 14105 true Chr02: 1945799-1959903 Glycine max
Glyma.02G022000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1945799-1955798 Glycine max
Glyma.02G022000 10.0kb downstream 10.0kb downstream 14105 true Chr02: 1955799-1969903 Glycine max
Glyma.02G022000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1959904-1969903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305323 5265 Fabidae View MSA
124063495 5270 Rosid View MSA
123740097 5271 Pentapetalae View MSA
122769970 5272 Eudicot View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.8901 0.0 644.392 High High
cufflinks 16.0941 0.0 81.2611    
cufflinks 102.012 0.0 815.125 High High
cufflinks 26.3397 0.0 147.73 High  
cufflinks 6.27023 0.0 35.955    
cufflinks 3.39175 0.0 18.4762   Low
cufflinks 8.10015 0.0 42.2257    
cufflinks 14.4546 0.0 81.1084    
cufflinks 12.3449 0.0 63.4243    
cufflinks 0.881        
cufflinks 12.396     High  
cufflinks 5.497        
cufflinks 0.226       Low
cufflinks 0.301       Low
cufflinks 22.444     High High
cufflinks 8.521     High  
cufflinks 0.348       Low
cufflinks 3.313        
cufflinks 1.892        
cufflinks 14.369     High  
cufflinks 8.057     High  
cufflinks 9.986     High  
cufflinks 3.912        
cufflinks 6.482     High  
cufflinks 12.782     High  
cufflinks 1.722        

0 Strain