Gene : Glyma.02G024200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  242
Name:  ? Glyma.02G024200 Secondary Identifier:  ? PAC:30509108
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G024200 0.5kb upstream 0.5kb upstream 8584 true Chr02: 2152655-2161238 Glycine max
Glyma.02G024200 0.5kb upstream 0.5kb upstream 500 false Chr02: 2160739-2161238 Glycine max
Glyma.02G024200 0.5kb downstream 0.5kb downstream 8584 true Chr02: 2152155-2160738 Glycine max
Glyma.02G024200 0.5kb downstream 0.5kb downstream 500 false Chr02: 2152155-2152654 Glycine max
Glyma.02G024200 1.0kb upstream 1.0kb upstream 9084 true Chr02: 2152655-2161738 Glycine max
Glyma.02G024200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2160739-2161738 Glycine max
Glyma.02G024200 1.0kb downstream 1.0kb downstream 9084 true Chr02: 2151655-2160738 Glycine max
Glyma.02G024200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2151655-2152654 Glycine max
Glyma.02G024200 2.0kb upstream 2.0kb upstream 10084 true Chr02: 2152655-2162738 Glycine max
Glyma.02G024200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2160739-2162738 Glycine max
Glyma.02G024200 2.0kb downstream 2.0kb downstream 10084 true Chr02: 2150655-2160738 Glycine max
Glyma.02G024200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2150655-2152654 Glycine max
Glyma.02G024200 5.0kb upstream 5.0kb upstream 13084 true Chr02: 2152655-2165738 Glycine max
Glyma.02G024200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2160739-2165738 Glycine max
Glyma.02G024200 5.0kb downstream 5.0kb downstream 13084 true Chr02: 2147655-2160738 Glycine max
Glyma.02G024200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2147655-2152654 Glycine max
Glyma.02G024200 10.0kb upstream 10.0kb upstream 18084 true Chr02: 2152655-2170738 Glycine max
Glyma.02G024200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2160739-2170738 Glycine max
Glyma.02G024200 10.0kb downstream 10.0kb downstream 18084 true Chr02: 2142655-2160738 Glycine max
Glyma.02G024200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2142655-2152654 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296431 5265 Fabidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4226 0.0 35.8098   High
cufflinks 0.47155 0.0 1.72599   Low
cufflinks 12.9788 0.0 34.6508   High
cufflinks 0.767255 0.0 2.71801    
cufflinks 3.09808 0.0 9.15405    
cufflinks 9.20857 0.0 24.75    
cufflinks 0.496249 0.0 1.80455   Low
cufflinks 0.976277 0.0 3.39226    
cufflinks 3.64707 0.0 10.6217    
cufflinks 2.239        
cufflinks 23.429     High High
cufflinks 5.808        
cufflinks 1.944        
cufflinks 0.536       Low
cufflinks 23.319     High High
cufflinks 3.396        
cufflinks 25.798     High High
cufflinks 2.165        
cufflinks 0.669       Low
cufflinks 2.206        
cufflinks 19.866     High High
cufflinks 1.649        
cufflinks 1.16       Low
cufflinks 15.366     High  
cufflinks 3.631        
cufflinks 20.182     High High

0 Strain