Gene : Glyma.02G055300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Genomic Order:  553
Name:  ? Glyma.02G055300 Secondary Identifier:  ? PAC:30506466
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G055300 0.5kb upstream 0.5kb upstream 3971 true Chr02: 4996677-5000647 Glycine max
Glyma.02G055300 0.5kb upstream 0.5kb upstream 500 false Chr02: 4996677-4997176 Glycine max
Glyma.02G055300 0.5kb downstream 0.5kb downstream 3971 true Chr02: 4997177-5001147 Glycine max
Glyma.02G055300 0.5kb downstream 0.5kb downstream 500 false Chr02: 5000648-5001147 Glycine max
Glyma.02G055300 1.0kb upstream 1.0kb upstream 4471 true Chr02: 4996177-5000647 Glycine max
Glyma.02G055300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4996177-4997176 Glycine max
Glyma.02G055300 1.0kb downstream 1.0kb downstream 4471 true Chr02: 4997177-5001647 Glycine max
Glyma.02G055300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5000648-5001647 Glycine max
Glyma.02G055300 2.0kb upstream 2.0kb upstream 5471 true Chr02: 4995177-5000647 Glycine max
Glyma.02G055300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4995177-4997176 Glycine max
Glyma.02G055300 2.0kb downstream 2.0kb downstream 5471 true Chr02: 4997177-5002647 Glycine max
Glyma.02G055300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5000648-5002647 Glycine max
Glyma.02G055300 5.0kb upstream 5.0kb upstream 8471 true Chr02: 4992177-5000647 Glycine max
Glyma.02G055300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4992177-4997176 Glycine max
Glyma.02G055300 5.0kb downstream 5.0kb downstream 8471 true Chr02: 4997177-5005647 Glycine max
Glyma.02G055300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5000648-5005647 Glycine max
Glyma.02G055300 10.0kb upstream 10.0kb upstream 13471 true Chr02: 4987177-5000647 Glycine max
Glyma.02G055300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4987177-4997176 Glycine max
Glyma.02G055300 10.0kb downstream 10.0kb downstream 13471 true Chr02: 4997177-5010647 Glycine max
Glyma.02G055300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5000648-5010647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311486 5265 Fabidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4409 0.0 48.9589    
cufflinks 19.7414 0.0 68.4311   High
cufflinks 11.8935 0.0 46.6731    
cufflinks 16.4166 0.0 62.2772    
cufflinks 11.0921 0.0 39.6306   Low
cufflinks 14.3039 0.0 79.4702    
cufflinks 14.456 0.0 43.4107    
cufflinks 17.8313 0.0 64.3649    
cufflinks 11.2809 0.0 44.9193   Low
cufflinks 3.672        
cufflinks 0.707       Low
cufflinks 2.827        
cufflinks 2.324        
cufflinks 2.606        
cufflinks 0.817       Low
cufflinks 4.842        
cufflinks 0.778       Low
cufflinks 3.388        
cufflinks 4.436        
cufflinks 5.643       High
cufflinks 0.868       Low
cufflinks 5.333       High
cufflinks 4.776        
cufflinks 0.887       Low
cufflinks 4.993        
cufflinks 1.048        

0 Strain