Gene : Glyma.02G051900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  519
Name:  ? Glyma.02G051900 Secondary Identifier:  ? PAC:30507186
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G051900 0.5kb upstream 0.5kb upstream 3848 true Chr02: 4738040-4741887 Glycine max
Glyma.02G051900 0.5kb upstream 0.5kb upstream 500 false Chr02: 4741388-4741887 Glycine max
Glyma.02G051900 0.5kb downstream 0.5kb downstream 3848 true Chr02: 4737540-4741387 Glycine max
Glyma.02G051900 0.5kb downstream 0.5kb downstream 500 false Chr02: 4737540-4738039 Glycine max
Glyma.02G051900 1.0kb upstream 1.0kb upstream 4348 true Chr02: 4738040-4742387 Glycine max
Glyma.02G051900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4741388-4742387 Glycine max
Glyma.02G051900 1.0kb downstream 1.0kb downstream 4348 true Chr02: 4737040-4741387 Glycine max
Glyma.02G051900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4737040-4738039 Glycine max
Glyma.02G051900 2.0kb upstream 2.0kb upstream 5348 true Chr02: 4738040-4743387 Glycine max
Glyma.02G051900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4741388-4743387 Glycine max
Glyma.02G051900 2.0kb downstream 2.0kb downstream 5348 true Chr02: 4736040-4741387 Glycine max
Glyma.02G051900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4736040-4738039 Glycine max
Glyma.02G051900 5.0kb upstream 5.0kb upstream 8348 true Chr02: 4738040-4746387 Glycine max
Glyma.02G051900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4741388-4746387 Glycine max
Glyma.02G051900 5.0kb downstream 5.0kb downstream 8348 true Chr02: 4733040-4741387 Glycine max
Glyma.02G051900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4733040-4738039 Glycine max
Glyma.02G051900 10.0kb upstream 10.0kb upstream 13348 true Chr02: 4738040-4751387 Glycine max
Glyma.02G051900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4741388-4751387 Glycine max
Glyma.02G051900 10.0kb downstream 10.0kb downstream 13348 true Chr02: 4728040-4741387 Glycine max
Glyma.02G051900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4728040-4738039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311985 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0526411 0.0 0.214273 Low Low
cufflinks 2.46864 0.0 15.8258    
cufflinks 1.33586 0.0 6.81966    
cufflinks 0.277826 0.0 2.40385    
cufflinks 1.05826 0.0 5.70654    
cufflinks 0.804669 0.0 5.93475    
cufflinks 0.125427 0.0 0.490254 Low Low
cufflinks 0.482723 0.0 2.2402    
cufflinks 6.96571 0.0 31.3887   High
cufflinks 0.026     Low  
cufflinks 0.015     Low  
cufflinks 0.175       High
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.795       High
cufflinks 0.04     Low  
cufflinks 0.034     Low  
cufflinks 0.089     Low  
cufflinks 0.408       High
cufflinks 0.014     Low  
cufflinks 0.027     Low  
cufflinks 0.036     Low  
cufflinks 0.031     Low  
cufflinks 0.012     Low  
cufflinks 0.033     Low  
cufflinks 0.013     Low  

0 Strain