Gene : Glyma.02G047100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22807:SF16 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  471
Name:  ? Glyma.02G047100 Secondary Identifier:  ? PAC:30506770
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6829 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G047100 0.5kb upstream 0.5kb upstream 4612 true Chr02: 4328917-4333528 Glycine max
Glyma.02G047100 0.5kb upstream 0.5kb upstream 500 false Chr02: 4328917-4329416 Glycine max
Glyma.02G047100 0.5kb downstream 0.5kb downstream 4612 true Chr02: 4329417-4334028 Glycine max
Glyma.02G047100 0.5kb downstream 0.5kb downstream 500 false Chr02: 4333529-4334028 Glycine max
Glyma.02G047100 1.0kb upstream 1.0kb upstream 5112 true Chr02: 4328417-4333528 Glycine max
Glyma.02G047100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4328417-4329416 Glycine max
Glyma.02G047100 1.0kb downstream 1.0kb downstream 5112 true Chr02: 4329417-4334528 Glycine max
Glyma.02G047100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4333529-4334528 Glycine max
Glyma.02G047100 2.0kb upstream 2.0kb upstream 6112 true Chr02: 4327417-4333528 Glycine max
Glyma.02G047100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4327417-4329416 Glycine max
Glyma.02G047100 2.0kb downstream 2.0kb downstream 6112 true Chr02: 4329417-4335528 Glycine max
Glyma.02G047100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4333529-4335528 Glycine max
Glyma.02G047100 5.0kb upstream 5.0kb upstream 9112 true Chr02: 4324417-4333528 Glycine max
Glyma.02G047100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4324417-4329416 Glycine max
Glyma.02G047100 5.0kb downstream 5.0kb downstream 9112 true Chr02: 4329417-4338528 Glycine max
Glyma.02G047100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4333529-4338528 Glycine max
Glyma.02G047100 10.0kb upstream 10.0kb upstream 14112 true Chr02: 4319417-4333528 Glycine max
Glyma.02G047100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4319417-4329416 Glycine max
Glyma.02G047100 10.0kb downstream 10.0kb downstream 14112 true Chr02: 4329417-4343528 Glycine max
Glyma.02G047100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4333529-4343528 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308126 5265 Fabidae View MSA
124050429 5270 Rosid View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.65462 0.0 21.4731    
cufflinks 6.81258 0.0 19.3815    
cufflinks 9.03503 0.0 24.9529    
cufflinks 6.22356 0.0 17.867    
cufflinks 11.2442 0.0 30.5816    
cufflinks 12.0704 0.0 32.686   High
cufflinks 4.91073 0.0 14.5478   Low
cufflinks 11.2423 0.0 30.5767    
cufflinks 10.0037 0.0 27.4329    
cufflinks 3.448        
cufflinks 1.649       Low
cufflinks 3.293        
cufflinks 5.292       High
cufflinks 5.68       High
cufflinks 2.098        
cufflinks 2.207        
cufflinks 3.136        
cufflinks 3.536        
cufflinks 3.216        
cufflinks 1.808       Low
cufflinks 1.578       Low
cufflinks 2.148        
cufflinks 2.866        
cufflinks 2.045        
cufflinks 2.153        
cufflinks 2.419        

0 Strain