Gene : Glyma.18G284500 G. max Wm82.a2.v1
Defline:  (1 of 23) PF02338 - OTU-like cysteine protease Genomic Order:  2845
Name:  ? Glyma.18G284500 Secondary Identifier:  ? PAC:30554618
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G284500 0.5kb upstream 0.5kb upstream 3655 true Chr18: 56513865-56517519 Glycine max
Glyma.18G284500 0.5kb upstream 0.5kb upstream 500 false Chr18: 56513865-56514364 Glycine max
Glyma.18G284500 0.5kb downstream 0.5kb downstream 3655 true Chr18: 56514365-56518019 Glycine max
Glyma.18G284500 0.5kb downstream 0.5kb downstream 500 false Chr18: 56517520-56518019 Glycine max
Glyma.18G284500 1.0kb upstream 1.0kb upstream 4155 true Chr18: 56513365-56517519 Glycine max
Glyma.18G284500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56513365-56514364 Glycine max
Glyma.18G284500 1.0kb downstream 1.0kb downstream 4155 true Chr18: 56514365-56518519 Glycine max
Glyma.18G284500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56517520-56518519 Glycine max
Glyma.18G284500 2.0kb upstream 2.0kb upstream 5155 true Chr18: 56512365-56517519 Glycine max
Glyma.18G284500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56512365-56514364 Glycine max
Glyma.18G284500 2.0kb downstream 2.0kb downstream 5155 true Chr18: 56514365-56519519 Glycine max
Glyma.18G284500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56517520-56519519 Glycine max
Glyma.18G284500 5.0kb upstream 5.0kb upstream 8155 true Chr18: 56509365-56517519 Glycine max
Glyma.18G284500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56509365-56514364 Glycine max
Glyma.18G284500 5.0kb downstream 5.0kb downstream 8155 true Chr18: 56514365-56522519 Glycine max
Glyma.18G284500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56517520-56522519 Glycine max
Glyma.18G284500 10.0kb upstream 10.0kb upstream 13155 true Chr18: 56504365-56517519 Glycine max
Glyma.18G284500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56504365-56514364 Glycine max
Glyma.18G284500 10.0kb downstream 10.0kb downstream 13155 true Chr18: 56514365-56527519 Glycine max
Glyma.18G284500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56517520-56527519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308748 5265 Fabidae View MSA
124064605 5270 Rosid View MSA
123736414 5271 Pentapetalae View MSA
122787286 5272 Eudicot View MSA
122043306 5273 Angiosperm View MSA
121345259 5274 Embryophyte View MSA
123424923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.48712 0.0 42.1585    
cufflinks 10.1947 0.0 40.1391    
cufflinks 2.34145 0.0 12.7174   Low
cufflinks 8.45881 0.0 34.2927    
cufflinks 16.9693 0.0 78.6186    
cufflinks 12.7038 0.0 54.046    
cufflinks 13.8676 0.0 63.9049    
cufflinks 7.7599 0.0 36.2381    
cufflinks 14.179 0.0 53.8159    
cufflinks 1.039        
cufflinks 0.216       Low
cufflinks 0.424       Low
cufflinks 1.389       High
cufflinks 1.859       High
cufflinks 0.467        
cufflinks 0.941        
cufflinks 0.852        
cufflinks 0.735        
cufflinks 1.077        
cufflinks 0.711        
cufflinks 0.4       Low
cufflinks 0.833        
cufflinks 1.436       High
cufflinks 0.411       Low
cufflinks 0.792        
cufflinks 0.676        

0 Strain