Gene : Glyma.02G061400 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  614
Name:  ? Glyma.02G061400 Secondary Identifier:  ? PAC:30507492
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G061400 0.5kb upstream 0.5kb upstream 4353 true Chr02: 5565280-5569632 Glycine max
Glyma.02G061400 0.5kb upstream 0.5kb upstream 500 false Chr02: 5569133-5569632 Glycine max
Glyma.02G061400 0.5kb downstream 0.5kb downstream 4353 true Chr02: 5564780-5569132 Glycine max
Glyma.02G061400 0.5kb downstream 0.5kb downstream 500 false Chr02: 5564780-5565279 Glycine max
Glyma.02G061400 1.0kb upstream 1.0kb upstream 4853 true Chr02: 5565280-5570132 Glycine max
Glyma.02G061400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5569133-5570132 Glycine max
Glyma.02G061400 1.0kb downstream 1.0kb downstream 4853 true Chr02: 5564280-5569132 Glycine max
Glyma.02G061400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5564280-5565279 Glycine max
Glyma.02G061400 2.0kb upstream 2.0kb upstream 5853 true Chr02: 5565280-5571132 Glycine max
Glyma.02G061400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5569133-5571132 Glycine max
Glyma.02G061400 2.0kb downstream 2.0kb downstream 5853 true Chr02: 5563280-5569132 Glycine max
Glyma.02G061400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5563280-5565279 Glycine max
Glyma.02G061400 5.0kb upstream 5.0kb upstream 8853 true Chr02: 5565280-5574132 Glycine max
Glyma.02G061400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5569133-5574132 Glycine max
Glyma.02G061400 5.0kb downstream 5.0kb downstream 8853 true Chr02: 5560280-5569132 Glycine max
Glyma.02G061400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5560280-5565279 Glycine max
Glyma.02G061400 10.0kb upstream 10.0kb upstream 13853 true Chr02: 5565280-5579132 Glycine max
Glyma.02G061400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5569133-5579132 Glycine max
Glyma.02G061400 10.0kb downstream 10.0kb downstream 13853 true Chr02: 5555280-5569132 Glycine max
Glyma.02G061400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5555280-5565279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302287 5265 Fabidae View MSA
124062136 5270 Rosid View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.03374 0.0 21.8766    
cufflinks 6.87136 0.0 23.506    
cufflinks 14.8914 0.0 61.7426   High
cufflinks 9.83268 0.0 36.9786    
cufflinks 5.02778 0.0 19.8697   Low
cufflinks 8.24162 0.0 28.1074    
cufflinks 6.49725 0.0 24.9663    
cufflinks 6.36009 0.0 24.563    
cufflinks 6.87938 0.0 23.5412    
cufflinks 1.326        
cufflinks 0.109       Low
cufflinks 2.98       High
cufflinks 1.126        
cufflinks 0.889        
cufflinks 0.226       Low
cufflinks 2.186        
cufflinks 0.309        
cufflinks 1.871        
cufflinks 1.651        
cufflinks 2.107        
cufflinks 0.135       Low
cufflinks 2.445        
cufflinks 2.65        
cufflinks 0.086       Low
cufflinks 1.967        
cufflinks 0.284        

0 Strain