Gene : Glyma.02G085000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR16023 - TAX1 BINDING PROTEIN-RELATED Genomic Order:  850
Name:  ? Glyma.02G085000 Secondary Identifier:  ? PAC:30506953
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G085000 0.5kb upstream 0.5kb upstream 20115 true Chr02: 7394162-7414276 Glycine max
Glyma.02G085000 0.5kb upstream 0.5kb upstream 500 false Chr02: 7413777-7414276 Glycine max
Glyma.02G085000 0.5kb downstream 0.5kb downstream 20115 true Chr02: 7393662-7413776 Glycine max
Glyma.02G085000 0.5kb downstream 0.5kb downstream 500 false Chr02: 7393662-7394161 Glycine max
Glyma.02G085000 1.0kb upstream 1.0kb upstream 20615 true Chr02: 7394162-7414776 Glycine max
Glyma.02G085000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7413777-7414776 Glycine max
Glyma.02G085000 1.0kb downstream 1.0kb downstream 20615 true Chr02: 7393162-7413776 Glycine max
Glyma.02G085000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7393162-7394161 Glycine max
Glyma.02G085000 2.0kb upstream 2.0kb upstream 21615 true Chr02: 7394162-7415776 Glycine max
Glyma.02G085000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7413777-7415776 Glycine max
Glyma.02G085000 2.0kb downstream 2.0kb downstream 21615 true Chr02: 7392162-7413776 Glycine max
Glyma.02G085000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7392162-7394161 Glycine max
Glyma.02G085000 5.0kb upstream 5.0kb upstream 24615 true Chr02: 7394162-7418776 Glycine max
Glyma.02G085000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7413777-7418776 Glycine max
Glyma.02G085000 5.0kb downstream 5.0kb downstream 24615 true Chr02: 7389162-7413776 Glycine max
Glyma.02G085000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7389162-7394161 Glycine max
Glyma.02G085000 10.0kb upstream 10.0kb upstream 29615 true Chr02: 7394162-7423776 Glycine max
Glyma.02G085000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7413777-7423776 Glycine max
Glyma.02G085000 10.0kb downstream 10.0kb downstream 29615 true Chr02: 7384162-7413776 Glycine max
Glyma.02G085000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7384162-7394161 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311338 5265 Fabidae View MSA
124065694 5270 Rosid View MSA
123742158 5271 Pentapetalae View MSA
122787400 5272 Eudicot View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.90881 0.0 27.4689   Low
cufflinks 6.45895 0.0 29.9017   Low
cufflinks 8.91643 0.0 47.5286    
cufflinks 8.20204 0.0 46.9261    
cufflinks 7.5862 0.0 33.1637    
cufflinks 9.82744 0.0 44.1019   High
cufflinks 7.18084 0.0 31.2136    
cufflinks 9.31486 0.0 48.0863   High
cufflinks 8.31956 0.0 41.9679    
cufflinks 0.267        
cufflinks 0.182        
cufflinks 0.253        
cufflinks 0.314       High
cufflinks 0.295       High
cufflinks 0.185        
cufflinks 0.185        
cufflinks 0.177       Low
cufflinks 0.293       High
cufflinks 0.262        
cufflinks 0.187        
cufflinks 0.208        
cufflinks 0.223        
cufflinks 0.217        
cufflinks 0.232        
cufflinks 0.167       Low
cufflinks 0.201        

0 Strain